myRT

myRT report for GCA_002241025.1_ASM224102v1

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Seq: NIHH01000086.1 Escherichia coli strain ICBEcBL-II-11(1) ECBL-II-11-1_contig_86, whole genome shotgun sequence (2220 bp)
Overview 1 RT 1: 1-1883 bp Neighborhood of RT #1 [1, 2128] RVT-GII GIIM Feature: gene Location: 1-311 bp Feature: gene Location: 226-534 bp Feature: gene Location: 605-2128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 878-1610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 878-1 61 0 bp Feature: domain Description: GIIM Note: maturase Location: 1685-1883 bp Feature: domain Description: GIIM Note: maturase Location: 1 685-1 883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NIHH01000027.1 Escherichia coli strain ICBEcBL-II-11(1) ECBL-II-11-1_contig_27, whole genome shotgun sequence (86696 bp)
Overview 1 RT 1: 35095-38974 bp Neighborhood of RT #1 [35095, 38979] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 35095-35811 bp Feature: domain Description: rph Location: 35098-35806 bp Feature: domain Description: rph Location: 35098-35806 bp Feature: gene Location: 35877-36518 bp Feature: domain Description: pyrE Location: 35880-36513 bp Feature: domain Description: pyrE Location: 35880-36513 bp Feature: gene Location: 36816-37775 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36951-37500 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36951-37500 bp Feature: gene Location: 37821-38417 bp Feature: domain Description: slmA Location: 37827-38403 bp Feature: domain Description: slmA Location: 3782 7-38403 bp Feature: gene Location: 38524-38979 bp Feature: domain Description: dut Location: 38527-38974 bp Feature: domain Description: dut Location: 3852 7-38974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)