myRT

myRT report for GCA_002241035.1_ASM224103v1

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Seq: NIHK01000014.1 Klebsiella pneumoniae strain ICBKpBL-III-03(1) KPBL-III-03-1_contig_14, whole genome shotgun sequence (187583 bp)
Overview 1 RT 1: 32953-40334 bp Neighborhood of RT #1 [32953, 40351] PRK09692 Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32953-34191 bp Feature: domain Description: PRK09692 Location: 32959-34141 bp Feature: domain Description: PRK09692 Location: 32959-341 41 bp Feature: gene Location: 34418-34877 bp Feature: domain Description: Integrase_1 Location: 34439-34706 bp Feature: domain Description: Integrase_1 Location: 34439-34706 bp Feature: gene Location: 34868-36949 bp Ori: OXV25600.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 35279-35723 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 35279-35723 bp Feature: gene Location: 36946-39540 bp Ori: OXV25601.1 Feature: domain Description: FimD Location: 36988-39529 bp Feature: domain Description: FimD Location: 36988-39529 bp Feature: gene Location: 39587-40351 bp Ori: OXV25602.1 Feature: domain Description: FimC Location: 39632-40334 bp Feature: domain Description: FimC Location: 39632-40334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NIHK01000052.1 Klebsiella pneumoniae strain ICBKpBL-III-03(1) KPBL-III-03-1_contig_52, whole genome shotgun sequence (34097 bp)
Overview 1 RT 1: 4747-7917 bp Neighborhood of RT #1 [4747, 7931] RVT-GII PRK10276 Feature: gene Location: 4747-4959 bp Feature: gene Location: 5129-5359 bp Feature: gene Location: 5593-7101 bp Ori: OXV18358.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5995-6709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5995-6709 bp Feature: gene Location: 7101-7352 bp Feature: gene Location: 7506-7931 bp Ori: OXV18360.1 Feature: domain Description: PRK10276 Location: 7509-7917 bp Feature: domain Description: PRK102 76 Location: 7509-7917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)