myRT

myRT report for GCA_002241075.1_V04_P4A5T148

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Seq: NDHZ01000040.1 Vibrio sp. V04_P4A5T148 scaffold30_size46383, whole genome shotgun sequence (46383 bp)
Overview 1 RT 1: 37210-46216 bp Neighborhood of RT #1 [37210, 46218] nirD PRK14989 RVT-UG17 SLATT_5 RVT_N RVT-GII GIIM Lip2 Feature: gene Location: 37210-37545 bp Ori: OXX35732.1 Feature: domain Description: nirD Location: 37231-37540 bp Feature: domain Description: nirD Location: 37231 -37540 bp Feature: gene Location: 37548-40136 bp Ori: OXX35733.1 Feature: domain Description: PRK14989 Location: 37551-40065 bp Feature: domain Description: PRK1 4989 Location: 37551 -40065 bp Feature: gene Location: 40668-41999 bp Ori: OXX35734.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 40896-41499 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 40896-41 499 bp Feature: gene Location: 42001-42663 bp Ori: OXX35735.1 Feature: domain Description: SLATT_5 Location: 42010-42607 bp Feature: domain Description: SLATT_5 Location: 4201 0-42607 bp Feature: gene Location: 43540-45012 bp Ori: OXX35736.1 Feature: domain Description: RVT_N Location: 43588-43828 bp Feature: domain Description: RVT_N Location: 43588-43828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43876-44503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43876-44503 bp Feature: domain Description: GIIM Note: maturase Location: 44560-44788 bp Feature: domain Description: GIIM Note: maturase Location: 44560-44788 bp Feature: gene Location: 45430-46218 bp Ori: OXX35737.1 Feature: domain Description: Lip2 Location: 45436-46216 bp Feature: domain Description: Lip2 Location: 45436-4621 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nirD (PRK09511), PRK14989 (nitrite reductase subunit NirD; Provisional), RVT-UG17, SLATT_5 (pfam18160), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Lip2 (COG3675)