myRT

myRT report for GCA_002241185.1_ASM224118v1

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Seq: NDIB01000288.1 Vibrio sp. V06_P1A73T115 scaffold73_size13316, whole genome shotgun sequence (13316 bp)
Overview 1 RT 1: 4185-13191 bp Neighborhood of RT #1 [4185, 13193] nirD PRK14989 RVT-UG17 SLATT_5 RVT_N RVT-GII GIIM Lip2 Feature: gene Location: 4185-4520 bp Ori: OXX20854.1 Feature: domain Description: nirD Location: 4206-4515 bp Feature: domain Description: nirD Location: 4206-451 5 bp Feature: gene Location: 4523-7111 bp Ori: OXX20855.1 Feature: domain Description: PRK14989 Location: 4526-7040 bp Feature: domain Description: PRK1 4989 Location: 4526-7040 bp Feature: gene Location: 7643-8974 bp Ori: OXX20856.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 7871-8474 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 7871 -8474 bp Feature: gene Location: 8976-9638 bp Ori: OXX20857.1 Feature: domain Description: SLATT_5 Location: 8985-9582 bp Feature: domain Description: SLATT_5 Location: 8985-9582 bp Feature: gene Location: 10515-11987 bp Ori: OXX20858.1 Feature: domain Description: RVT_N Location: 10563-10803 bp Feature: domain Description: RVT_N Location: 1 0563-1 0803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10851-11478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0851 -1 1 478 bp Feature: domain Description: GIIM Note: maturase Location: 11535-11763 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 535-1 1 763 bp Feature: gene Location: 12405-13193 bp Ori: OXX20859.1 Feature: domain Description: Lip2 Location: 12411-13191 bp Feature: domain Description: Lip2 Location: 1 241 1 -1 31 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nirD (PRK09511), PRK14989 (nitrite reductase subunit NirD; Provisional), RVT-UG17, SLATT_5 (pfam18160), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Lip2 (COG3675)