myRT

myRT report for GCA_002241365.1_ASM224136v1

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Seq: NDIL01000065.1 Vibrio sp. V18_P1S4T112 scaffold40_size30265, whole genome shotgun sequence (30265 bp)
Overview 1 RT 1: 6610-16423 bp Neighborhood of RT #1 [6610, 16428] PRK00767 Lip2 RVT_N RVT-GII GIIM SLATT_5 RVT-UG17 PRK14989 nirD Feature: gene Location: 6610-7203 bp Ori: OXX56067.1 Feature: domain Description: PRK00767 Location: 6613-7195 bp Feature: domain Description: PRK00767 Location: 661 3-71 95 bp Feature: gene Location: 7420-8208 bp Ori: OXX56068.1 Feature: domain Description: Lip2 Location: 7426-8206 bp Feature: domain Description: Lip2 Location: 7426-8206 bp Feature: gene Location: 8626-10098 bp Ori: OXX56069.1 Feature: domain Description: RVT_N Location: 8674-8914 bp Feature: domain Description: RVT_N Location: 8674-891 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8962-9589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8962-9589 bp Feature: domain Description: GIIM Note: maturase Location: 9646-9874 bp Feature: domain Description: GIIM Note: maturase Location: 9646-9874 bp Feature: gene Location: 10975-11637 bp Ori: OXX56070.1 Feature: domain Description: SLATT_5 Location: 10984-11581 bp Feature: domain Description: SLATT_5 Location: 1 0984-1 1 581 bp Feature: gene Location: 11639-12970 bp Ori: OXX56071.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 11867-12470 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 1 867-1 2470 bp Feature: gene Location: 13502-16090 bp Ori: OXX56072.1 Feature: domain Description: PRK14989 Location: 13505-16019 bp Feature: domain Description: PRK1 4989 Location: 1 3505-1 601 9 bp Feature: gene Location: 16093-16428 bp Ori: OXX56073.1 Feature: domain Description: nirD Location: 16114-16423 bp Feature: domain Description: nirD Location: 1 61 1 4-1 6423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00767 (transcriptional regulator BetI; Validated), Lip2 (COG3675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), SLATT_5 (pfam18160), RVT-UG17, PRK14989 (nitrite reductase subunit NirD; Provisional), nirD (PRK09511)