myRT

myRT report for GCA_002241495.2_ASM224149v2

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Seq: NLBS02000002.1 Salmonella enterica strain CFSAN051024 CFSAN051024_2, whole genome shotgun sequence (458452 bp)
Overview 1 RT 1: 82673-89126 bp Neighborhood of RT #1 [82673, 89555] PRK09678 RVT-UG3 RVT-UG8 Tra5 reactive_PduG Feature: gene Location: 82673-83434 bp Feature: gene Location: 83434-83706 bp Ori: PUU21401.1 Feature: domain Description: PRK09678 Location: 83443-83599 bp Feature: domain Description: PRK09678 Location: 83443-83599 bp Feature: gene Location: 84094-85371 bp Ori: PUU21402.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 84382-84877 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 84382-84877 bp Feature: gene Location: 85362-87380 bp Ori: PUU21403.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 85935-86388 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 85935-86388 bp Feature: gene Location: 88060-88839 bp Feature: domain Description: Tra5 Location: 88132-88834 bp Feature: domain Description: Tra5 Location: 881 32-88834 bp Feature: gene Location: 88841-89555 bp Feature: domain Description: reactive_PduG Location: 88844-89126 bp Feature: domain Description: reactive_PduG Location: 88844-891 26 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3, RVT-UG8, Tra5 (COG2801), reactive_PduG (TIGR04491)

Seq: NLBS02000013.1 Salmonella enterica strain CFSAN051024 CFSAN051024_13, whole genome shotgun sequence (81518 bp)
Overview 1 RT 1: 31372-35052 bp Neighborhood of RT #1 [31372, 35052] Arm-DNA-bind_3 INT_P4_C RVT-Retrons Feature: gene Location: 31372-31701 bp Feature: domain Description: Arm-DNA-bind_3 Location: 31381-31636 bp Feature: domain Description: Arm-DNA-bind_3 Location: 31381-31636 bp Feature: gene Location: 31710-32216 bp Ori: PUU14660.1 Feature: domain Description: INT_P4_C Location: 31713-32148 bp Feature: domain Description: INT_P4_C Location: 31713-32 148 bp Feature: gene Location: 32298-33230 bp Ori: PUU14703.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32454-32997 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 454-32 997 bp Feature: gene Location: 33556-34425 bp Feature: gene Location: 34843-35052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-Retrons