myRT

myRT report for GCA_002241515.2_ASM224151v2

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Seq: NLBU02000019.1 Salmonella enterica subsp. enterica serovar Newport strain CFSAN051027 CFSAN051027_19, whole genome shotgun sequence (26887 bp)
Overview 1 RT 1: 6262-9877 bp Neighborhood of RT #1 [6262, 9942] RVT-Retrons INT_P4_C Arm-DNA-bind_3 Feature: gene Location: 6262-6471 bp Feature: gene Location: 6889-7758 bp Feature: gene Location: 8084-9016 bp Ori: PUU15992.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8240-8783 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8240-8783 bp Feature: gene Location: 9098-9604 bp Ori: PUU15976.1 Feature: domain Description: INT_P4_C Location: 9101-9536 bp Feature: domain Description: INT_P4_C Location: 91 01 -9536 bp Feature: gene Location: 9613-9942 bp Feature: domain Description: Arm-DNA-bind_3 Location: 9622-9877 bp Feature: domain Description: Arm-DNA-bind_3 Location: 9622-9877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, INT_P4_C (cd00801), Arm-DNA-bind_3 (pfam13356)

Seq: NLBU02000010.1 Salmonella enterica subsp. enterica serovar Newport strain CFSAN051027 CFSAN051027_10, whole genome shotgun sequence (138310 bp)
Overview 1 RT 1: 48755-55637 bp Neighborhood of RT #1 [48755, 55637] reactive_PduG Tra5 RVT-UG8 RVT-UG3 PRK09678 Feature: gene Location: 48755-49469 bp Feature: domain Description: reactive_PduG Location: 48758-49040 bp Feature: domain Description: reactive_PduG Location: 48758-49040 bp Feature: gene Location: 49471-50250 bp Feature: domain Description: Tra5 Location: 49543-50245 bp Feature: domain Description: Tra5 Location: 49543-502 45 bp Feature: gene Location: 50930-52948 bp Ori: PUU18450.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 51503-51956 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 51503-51956 bp Feature: gene Location: 52939-54216 bp Ori: PUU18451.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 53227-53722 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 532 2 7-5372 2 bp Feature: gene Location: 54604-54876 bp Ori: PUU18452.1 Feature: domain Description: PRK09678 Location: 54613-54769 bp Feature: domain Description: PRK09678 Location: 54613-54769 bp Feature: gene Location: 54876-55637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT reactive_PduG (TIGR04491), Tra5 (COG2801), RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional)