myRT

myRT report for GCA_002241535.2_ASM224153v2

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Seq: NLBX02000019.1 Salmonella enterica subsp. enterica serovar Bardo strain CFSAN051030 CFSAN051030_19, whole genome shotgun sequence (41441 bp)
Overview 1 RT 1: 31372-35052 bp Neighborhood of RT #1 [31372, 35052] Arm-DNA-bind_3 INT_P4_C RVT-Retrons Feature: gene Location: 31372-31701 bp Feature: domain Description: Arm-DNA-bind_3 Location: 31381-31636 bp Feature: domain Description: Arm-DNA-bind_3 Location: 31 381 -31 636 bp Feature: gene Location: 31710-32216 bp Ori: PUT88588.1 Feature: domain Description: INT_P4_C Location: 31713-32148 bp Feature: domain Description: INT_P4_C Location: 31 71 3-321 48 bp Feature: gene Location: 32298-33230 bp Ori: PUT88600.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32454-32997 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32454-32997 bp Feature: gene Location: 33556-34425 bp Feature: gene Location: 34843-35052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-Retrons

Seq: NLBX02000001.1 Salmonella enterica subsp. enterica serovar Bardo strain CFSAN051030 CFSAN051030_1, whole genome shotgun sequence (776414 bp)
Overview 1 RT 1: 686859-693741 bp Neighborhood of RT #1 [686859, 693741] reactive_PduG Tra5 RVT-UG8 RVT-UG3 PRK09678 Feature: gene Location: 686859-687573 bp Feature: domain Description: reactive_PduG Location: 686862-687144 bp Feature: domain Description: reactive_PduG Location: 686862 -687144 bp Feature: gene Location: 687575-688354 bp Feature: domain Description: Tra5 Location: 687647-688349 bp Feature: domain Description: Tra5 Location: 687647-688349 bp Feature: gene Location: 689034-691052 bp Ori: PUU67383.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 689607-690060 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 689607-690060 bp Feature: gene Location: 691043-692320 bp Ori: PUU67384.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 691331-691826 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 691331-69182 6 bp Feature: gene Location: 692708-692980 bp Ori: PUU67385.1 Feature: domain Description: PRK09678 Location: 692717-692873 bp Feature: domain Description: PRK09678 Location: 692 717-692 873 bp Feature: gene Location: 692980-693741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT reactive_PduG (TIGR04491), Tra5 (COG2801), RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional)