myRT

myRT report for GCA_002241615.2_ASM224161v2

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Seq: NLBP02000001.1 Salmonella enterica subsp. enterica serovar Newport strain CFSAN051020 CFSAN051020_1, whole genome shotgun sequence (477781 bp)
Overview 1 RT 1: 388226-395108 bp Neighborhood of RT #1 [388226, 395108] reactive_PduG Tra5 RVT-UG8 RVT-UG3 PRK09678 Feature: gene Location: 388226-388940 bp Feature: domain Description: reactive_PduG Location: 388229-388511 bp Feature: domain Description: reactive_PduG Location: 388229-38851 1 bp Feature: gene Location: 388942-389721 bp Feature: domain Description: Tra5 Location: 389014-389716 bp Feature: domain Description: Tra5 Location: 38901 4-38971 6 bp Feature: gene Location: 390401-392419 bp Ori: PUU42034.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 390974-391427 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 390974-391 427 bp Feature: gene Location: 392410-393687 bp Ori: PUU42035.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 392698-393193 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 392698-3931 93 bp Feature: gene Location: 394075-394347 bp Ori: PUU42036.1 Feature: domain Description: PRK09678 Location: 394084-394240 bp Feature: domain Description: PRK09678 Location: 394084-394240 bp Feature: gene Location: 394347-395108 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT reactive_PduG (TIGR04491), Tra5 (COG2801), RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: NLBP02000019.1 Salmonella enterica subsp. enterica serovar Newport strain CFSAN051020 CFSAN051020_19, whole genome shotgun sequence (81365 bp)
Overview 1 RT 1: 31372-35052 bp Neighborhood of RT #1 [31372, 35052] Arm-DNA-bind_3 INT_P4_C RVT-Retrons Feature: gene Location: 31372-31701 bp Feature: domain Description: Arm-DNA-bind_3 Location: 31381-31636 bp Feature: domain Description: Arm-DNA-bind_3 Location: 31381-31636 bp Feature: gene Location: 31710-32216 bp Ori: PUU30133.1 Feature: domain Description: INT_P4_C Location: 31713-32148 bp Feature: domain Description: INT_P4_C Location: 31713-32 148 bp Feature: gene Location: 32298-33230 bp Ori: PUU30176.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32454-32997 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 454-32 997 bp Feature: gene Location: 33556-34425 bp Feature: gene Location: 34843-35052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-Retrons