myRT

myRT report for GCA_002241635.2_ASM224163v2

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Seq: NLBQ02000022.1 Salmonella enterica subsp. enterica serovar Newport strain CFSAN051022 CFSAN051022_22, whole genome shotgun sequence (81365 bp)
Overview 1 RT 1: 46314-49929 bp Neighborhood of RT #1 [46314, 49994] RVT-Retrons INT_P4_C Arm-DNA-bind_3 Feature: gene Location: 46314-46523 bp Feature: gene Location: 46941-47810 bp Feature: gene Location: 48136-49068 bp Ori: PUU42200.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48292-48835 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48292-48835 bp Feature: gene Location: 49150-49656 bp Ori: PUU42172.1 Feature: domain Description: INT_P4_C Location: 49153-49588 bp Feature: domain Description: INT_P4_C Location: 491 53-49588 bp Feature: gene Location: 49665-49994 bp Feature: domain Description: Arm-DNA-bind_3 Location: 49674-49929 bp Feature: domain Description: Arm-DNA-bind_3 Location: 49674-49929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, INT_P4_C (cd00801), Arm-DNA-bind_3 (pfam13356)

Seq: NLBQ02000011.1 Salmonella enterica subsp. enterica serovar Newport strain CFSAN051022 CFSAN051022_11, whole genome shotgun sequence (168539 bp)
Overview 1 RT 1: 78984-85866 bp Neighborhood of RT #1 [78984, 85866] reactive_PduG Tra5 RVT-UG8 RVT-UG3 PRK09678 Feature: gene Location: 78984-79698 bp Feature: domain Description: reactive_PduG Location: 78987-79269 bp Feature: domain Description: reactive_PduG Location: 78987-792 69 bp Feature: gene Location: 79700-80479 bp Feature: domain Description: Tra5 Location: 79772-80474 bp Feature: domain Description: Tra5 Location: 79772 -80474 bp Feature: gene Location: 81159-83177 bp Ori: PUU44979.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 81732-82185 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 81732 -82 185 bp Feature: gene Location: 83168-84445 bp Ori: PUU44980.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 83456-83951 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 83456-83951 bp Feature: gene Location: 84833-85105 bp Ori: PUU44981.1 Feature: domain Description: PRK09678 Location: 84842-84998 bp Feature: domain Description: PRK09678 Location: 84842 -84998 bp Feature: gene Location: 85105-85866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT reactive_PduG (TIGR04491), Tra5 (COG2801), RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional)