myRT

myRT report for GCA_002241705.2_ASM224170v2

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Seq: NLBT02000002.1 Salmonella enterica subsp. enterica serovar Newport strain CFSAN051026 CFSAN051026_2, whole genome shotgun sequence (423628 bp)
Overview 1 RT 1: 334073-340955 bp Neighborhood of RT #1 [334073, 340955] reactive_PduG Tra5 RVT-UG8 RVT-UG3 PRK09678 Feature: gene Location: 334073-334787 bp Feature: domain Description: reactive_PduG Location: 334076-334358 bp Feature: domain Description: reactive_PduG Location: 334076-334358 bp Feature: gene Location: 334789-335568 bp Feature: domain Description: Tra5 Location: 334861-335563 bp Feature: domain Description: Tra5 Location: 334861 -335563 bp Feature: gene Location: 336248-338266 bp Ori: PUU34865.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 336821-337274 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 336821 -337274 bp Feature: gene Location: 338257-339534 bp Ori: PUU34866.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 338545-339040 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 338545-339040 bp Feature: gene Location: 339922-340194 bp Ori: PUU34867.1 Feature: domain Description: PRK09678 Location: 339931-340087 bp Feature: domain Description: PRK09678 Location: 339931 -340087 bp Feature: gene Location: 340194-340955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT reactive_PduG (TIGR04491), Tra5 (COG2801), RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: NLBT02000015.1 Salmonella enterica subsp. enterica serovar Newport strain CFSAN051026 CFSAN051026_15, whole genome shotgun sequence (81518 bp)
Overview 1 RT 1: 46467-50082 bp Neighborhood of RT #1 [46467, 50147] RVT-Retrons INT_P4_C Arm-DNA-bind_3 Feature: gene Location: 46467-46676 bp Feature: gene Location: 47094-47963 bp Feature: gene Location: 48289-49221 bp Ori: PUU27675.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48445-48988 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48445-48988 bp Feature: gene Location: 49303-49809 bp Ori: PUU27646.1 Feature: domain Description: INT_P4_C Location: 49306-49741 bp Feature: domain Description: INT_P4_C Location: 49306-49741 bp Feature: gene Location: 49818-50147 bp Feature: domain Description: Arm-DNA-bind_3 Location: 49827-50082 bp Feature: domain Description: Arm-DNA-bind_3 Location: 4982 7-50082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, INT_P4_C (cd00801), Arm-DNA-bind_3 (pfam13356)