myRT

myRT report for GCA_002241725.2_ASM224172v2

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Seq: NLBV02000016.1 Salmonella enterica subsp. enterica serovar Newport strain CFSAN051028 CFSAN051028_16, whole genome shotgun sequence (81518 bp)
Overview 1 RT 1: 31372-35052 bp Neighborhood of RT #1 [31372, 35052] Arm-DNA-bind_3 INT_P4_C RVT-Retrons Feature: gene Location: 31372-31701 bp Feature: domain Description: Arm-DNA-bind_3 Location: 31381-31636 bp Feature: domain Description: Arm-DNA-bind_3 Location: 31 381 -31 636 bp Feature: gene Location: 31710-32216 bp Ori: PUU15889.1 Feature: domain Description: INT_P4_C Location: 31713-32148 bp Feature: domain Description: INT_P4_C Location: 31 71 3-321 48 bp Feature: gene Location: 32298-33230 bp Ori: PUU15932.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32454-32997 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32454-32997 bp Feature: gene Location: 33556-34425 bp Feature: gene Location: 34843-35052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-Retrons

Seq: NLBV02000011.1 Salmonella enterica subsp. enterica serovar Newport strain CFSAN051028 CFSAN051028_11, whole genome shotgun sequence (168410 bp)
Overview 1 RT 1: 78856-85738 bp Neighborhood of RT #1 [78856, 85738] reactive_PduG Tra5 RVT-UG8 RVT-UG3 PRK09678 Feature: gene Location: 78856-79570 bp Feature: domain Description: reactive_PduG Location: 78859-79141 bp Feature: domain Description: reactive_PduG Location: 78859-79141 bp Feature: gene Location: 79572-80351 bp Feature: domain Description: Tra5 Location: 79644-80346 bp Feature: domain Description: Tra5 Location: 79644-80346 bp Feature: gene Location: 81031-83049 bp Ori: PUU17358.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 81604-82057 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 81604-82 057 bp Feature: gene Location: 83040-84317 bp Ori: PUU17359.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 83328-83823 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 8332 8-8382 3 bp Feature: gene Location: 84705-84977 bp Ori: PUU17360.1 Feature: domain Description: PRK09678 Location: 84714-84870 bp Feature: domain Description: PRK09678 Location: 84714-84870 bp Feature: gene Location: 84977-85738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT reactive_PduG (TIGR04491), Tra5 (COG2801), RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional)