myRT

myRT report for GCA_002242095.1_ASM224209v1

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Seq: NMXP01000251.1 Shigella flexneri strain FC420 NODE_251_length_2272_cov_372.542_ID_501, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2272 bp Neighborhood of RT #1 [93, 2272] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1687-1995 bp Feature: gene Location: 1910-2272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NMXP01000197.1 Shigella flexneri strain FC420 NODE_197_length_4283_cov_92.945_ID_393, whole genome shotgun sequence (4283 bp)
Overview 1 RT 1: 129-1607 bp Neighborhood of RT #1 [129, 1607] RVT-GII DDE_Tnp_IS66_C Feature: gene Location: 129-1311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 9-978 bp Feature: gene Location: 1385-1504 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1427-1502 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 142 7-1502 bp Feature: gene Location: 1482-1607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_IS66_C (pfam13817)

Seq: NMXP01000150.1 Shigella flexneri strain FC420 NODE_150_length_8305_cov_49.2008_ID_299, whole genome shotgun sequence (8305 bp)
Overview 1 RT 1: 1-1969 bp Neighborhood of RT #1 [1, 2410] RVT-GII InsE Feature: gene Location: 1-201 bp Feature: gene Location: 649-827 bp Feature: gene Location: 921-1160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 927-1134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 927-113 4 bp Feature: gene Location: 1355-1721 bp Feature: gene Location: 1723-2410 bp Feature: domain Description: InsE Location: 1726-1969 bp Feature: domain Description: InsE Location: 1726-1969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII

Seq: NMXP01000169.1 Shigella flexneri strain FC420 NODE_169_length_6227_cov_74.6503_ID_337, whole genome shotgun sequence (6227 bp)
Overview 1 RT 1: 377-3022 bp Neighborhood of RT #1 [377, 3033] DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 377-556 bp Feature: domain Description: DDE_Tnp_IS66 Location: 383-539 bp Feature: domain Description: DDE_Tnp_IS66 Location: 383-539 bp Feature: gene Location: 553-1007 bp Feature: gene Location: 1081-2259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1228-1882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1228-1882 bp Feature: domain Description: GIIM Note: maturase Location: 1960-2182 bp Feature: domain Description: GIIM Note: maturase Location: 1960-2182 bp Feature: gene Location: 2342-2521 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2387-2498 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2387-24 98 bp Feature: gene Location: 2551-3033 bp Feature: domain Description: COG3547 Location: 2569-3022 bp Feature: domain Description: COG354 7 Location: 2569-3022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase ), DDE_Tnp_IS66 (pfam03050)