myRT

myRT report for GCA_002243745.1_ASM224374v1

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Seq: KZ268949.1 Escherichia coli strain 35-490 genomic scaffold aervJ-supercont1.5, whole genome shotgun sequence (114014 bp)
Overview 1 RT 1: 41495-45319 bp 2 RT 2: 56145-60768 bp Neighborhood of RT #1 [41495, 45321] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [56145, 60776] PRK08181 rve RVT-GII PRK10173 PRK10173 Feature: gene Location: 41495-41899 bp Feature: domain Description: InsE Location: 41525-41861 bp Feature: domain Description: InsE Location: 41 525-41 861 bp Feature: gene Location: 41928-42284 bp Feature: domain Description: PHA02517 Location: 41931-42240 bp Feature: domain Description: PHA0251 7 Location: 41 931 -42240 bp Feature: gene Location: 42401-43924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42674-43406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42674-43406 bp Feature: domain Description: GIIM Note: maturase Location: 43481-43679 bp Feature: domain Description: GIIM Note: maturase Location: 43481 -43679 bp Feature: gene Location: 44516-44995 bp Feature: domain Description: PHA02517 Location: 44576-44930 bp Feature: domain Description: PHA0251 7 Location: 44576-44930 bp Feature: gene Location: 44995-45321 bp Feature: domain Description: InsE Location: 44998-45319 bp Feature: domain Description: InsE Location: 44998-4531 9 bp Feature: gene Location: 56145-56900 bp Feature: domain Description: PRK08181 Location: 56169-56880 bp Feature: domain Description: PRK081 81 Location: 561 69-56880 bp Feature: gene Location: 56897-58396 bp Feature: domain Description: rve Location: 57269-57662 bp Feature: domain Description: rve Location: 57269-57662 bp Feature: gene Location: 59490-59993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59763-59835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59763-59835 bp Feature: gene Location: 60032-60352 bp Feature: domain Description: PRK10173 Location: 60035-60263 bp Feature: domain Description: PRK1 01 73 Location: 60035-60263 bp Feature: gene Location: 60327-60776 bp Feature: domain Description: PRK10173 Location: 60330-60768 bp Feature: domain Description: PRK1 01 73 Location: 60330-60768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK08181 (transposase; Validated), rve (pfam00665), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)