myRT

myRT report for GCA_002244065.1_ASM224406v1

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Seq: KZ269122.1 Escherichia coli strain 177-2416 genomic scaffold aervF-supercont1.5, whole genome shotgun sequence (392621 bp)
Overview 1 RT 1: 100954-105478 bp Neighborhood of RT #1 [100954, 105627] HTH_33 DDE_3 RVT-AbiP2 PRK09183 COG4584 Feature: gene Location: 100954-101340 bp Feature: gene Location: 101416-102315 bp Ori: OYA52353.1 Feature: domain Description: HTH_33 Location: 101578-101740 bp Feature: domain Description: HTH_33 Location: 1 01 578-1 01 740 bp Feature: domain Description: DDE_3 Location: 101782-102211 bp Feature: domain Description: DDE_3 Location: 1 01 782-1 0221 1 bp Feature: gene Location: 102417-103787 bp Ori: OYA52354.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 102678-103134 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 02678-1 031 34 bp Feature: gene Location: 103826-104605 bp Ori: OYA52355.1 Feature: domain Description: PRK09183 Location: 103832-104603 bp Feature: domain Description: PRK091 83 Location: 1 03832-1 04603 bp Feature: gene Location: 104605-105627 bp Ori: OYA52356.1 Feature: domain Description: COG4584 Location: 104608-105478 bp Feature: domain Description: COG4584 Location: 1 04608-1 05478 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2, PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase )

Seq: KZ269126.1 Escherichia coli strain 177-2416 genomic scaffold aervF-supercont1.9, whole genome shotgun sequence (127460 bp)
Overview 1 RT 1: 28168-32518 bp Neighborhood of RT #1 [28168, 32520] TetR_N TetR_C_28 PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 28168-28746 bp Ori: OYA50616.1 Feature: domain Description: TetR_N Location: 28237-28372 bp Feature: domain Description: TetR_N Location: 2 82 37-2 8372 bp Feature: domain Description: TetR_C_28 Location: 28447-28735 bp Feature: domain Description: TetR_C_2 8 Location: 2 8447-2 8735 bp Feature: gene Location: 29037-29483 bp Ori: OYA50617.1 Feature: domain Description: PHA02517 Location: 29040-29481 bp Feature: domain Description: PHA02 517 Location: 2 9040-2 9481 bp Feature: gene Location: 29600-31123 bp Ori: OYA50618.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29873-30605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9873-30605 bp Feature: domain Description: GIIM Note: maturase Location: 30680-30878 bp Feature: domain Description: GIIM Note: maturase Location: 30680-30878 bp Feature: gene Location: 31715-32194 bp Ori: OYA50619.1 Feature: domain Description: PHA02517 Location: 31775-32129 bp Feature: domain Description: PHA02 517 Location: 31775-32 12 9 bp Feature: gene Location: 32194-32520 bp Ori: OYA50620.1 Feature: domain Description: InsE Location: 32197-32518 bp Feature: domain Description: InsE Location: 32 197-32 518 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TetR_N (pfam00440), TetR_C_28 (pfam17937), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)