myRT

myRT report for GCA_002244125.1_ASM224412v1

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Seq: KZ269181.1 Escherichia coli strain 228-2945 genomic scaffold aervZ-supercont1.6, whole genome shotgun sequence (153351 bp)
Overview 1 RT 1: 48447-54183 bp 2 RT 2: 149170-151851 bp Neighborhood of RT #1 [48447, 54221] PRK08181 rve RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [149170, 151853] PRK10173 PRK10173 RVT-GII PHA02517 InsE Feature: gene Location: 48447-49202 bp Feature: domain Description: PRK08181 Location: 48471-49182 bp Feature: domain Description: PRK081 81 Location: 48471 -491 82 bp Feature: gene Location: 49199-50698 bp Feature: domain Description: rve Location: 49571-49964 bp Feature: domain Description: rve Location: 49571 -49964 bp Feature: gene Location: 51792-53315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52065-52797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52065-52797 bp Feature: domain Description: GIIM Note: maturase Location: 52872-53070 bp Feature: domain Description: GIIM Note: maturase Location: 52872-53070 bp Feature: gene Location: 53432-53788 bp Feature: domain Description: PHA02517 Location: 53435-53744 bp Feature: domain Description: PHA0251 7 Location: 53435-53744 bp Feature: gene Location: 53817-54221 bp Feature: domain Description: InsE Location: 53847-54183 bp Feature: domain Description: InsE Location: 53847-541 83 bp Feature: gene Location: 149170-149619 bp Feature: domain Description: PRK10173 Location: 149173-149611 bp Feature: domain Description: PRK1 01 73 Location: 1 491 73-1 4961 1 bp Feature: gene Location: 149594-149914 bp Feature: domain Description: PRK10173 Location: 149597-149825 bp Feature: domain Description: PRK1 01 73 Location: 1 49597-1 49825 bp Feature: gene Location: 149953-150456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150226-150298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 50226-1 50298 bp Feature: gene Location: 151048-151527 bp Feature: domain Description: PHA02517 Location: 151108-151462 bp Feature: domain Description: PHA0251 7 Location: 1 51 1 08-1 51 462 bp Feature: gene Location: 151527-151853 bp Feature: domain Description: InsE Location: 151530-151851 bp Feature: domain Description: InsE Location: 1 51 530-1 51 851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08181 (transposase; Validated), rve (pfam00665), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)