myRT

myRT report for GCA_002244205.1_ASM224420v1

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Seq: KZ269208.1 Escherichia coli strain 265-3407 genomic scaffold aervu-supercont1.6, whole genome shotgun sequence (160835 bp)
Overview 1 RT 1: 28347-32697 bp Neighborhood of RT #1 [28347, 32699] TetR_N TetR_C_28 PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 28347-28925 bp Feature: domain Description: TetR_N Location: 28416-28551 bp Feature: domain Description: TetR_N Location: 2841 6-28551 bp Feature: domain Description: TetR_C_28 Location: 28626-28914 bp Feature: domain Description: TetR_C_28 Location: 28626-2891 4 bp Feature: gene Location: 29216-29587 bp Feature: domain Description: PHA02517 Location: 29219-29585 bp Feature: domain Description: PHA0251 7 Location: 2921 9-29585 bp Feature: gene Location: 29779-31302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30052-30784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30052-30784 bp Feature: domain Description: GIIM Note: maturase Location: 30859-31057 bp Feature: domain Description: GIIM Note: maturase Location: 30859-31 057 bp Feature: gene Location: 31894-32373 bp Feature: domain Description: PHA02517 Location: 31954-32308 bp Feature: domain Description: PHA0251 7 Location: 31 954-32308 bp Feature: gene Location: 32373-32699 bp Feature: domain Description: InsE Location: 32376-32697 bp Feature: domain Description: InsE Location: 32376-32697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TetR_N (pfam00440), TetR_C_28 (pfam17937), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: KZ269209.1 Escherichia coli strain 265-3407 genomic scaffold aervu-supercont1.7, whole genome shotgun sequence (130391 bp)
Overview 1 RT 1: 87156-93729 bp Neighborhood of RT #1 [87156, 93749] autotrans_barl PHA02517 RVT-GII GIIM rve PRK08181 Feature: gene Location: 87156-87725 bp Feature: domain Description: autotrans_barl Location: 87237-87672 bp Feature: domain Description: autotrans_barl Location: 872 37-87672 bp Feature: gene Location: 87728-88174 bp Feature: domain Description: PHA02517 Location: 87731-88172 bp Feature: domain Description: PHA02 517 Location: 87731-88172 bp Feature: gene Location: 88291-89814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88564-89296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88564-892 96 bp Feature: domain Description: GIIM Note: maturase Location: 89371-89569 bp Feature: domain Description: GIIM Note: maturase Location: 89371-89569 bp Feature: gene Location: 91498-92997 bp Feature: domain Description: rve Location: 91870-92263 bp Feature: domain Description: rve Location: 91870-92 2 63 bp Feature: gene Location: 92994-93749 bp Feature: domain Description: PRK08181 Location: 93018-93729 bp Feature: domain Description: PRK08181 Location: 93018-9372 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT autotrans_barl (TIGR01414), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), rve (pfam00665), PRK08181 (transposase; Validated)

Seq: KZ269203.1 Escherichia coli strain 265-3407 genomic scaffold aervu-supercont1.1, whole genome shotgun sequence (1795920 bp)
Overview 1 RT 1: 1123215-1128629 bp Neighborhood of RT #1 [1123215, 1128629] Pat_hypo_Ecoli_Z1214_like PHA02517 RVT-GII GIIM InsE Feature: gene Location: 1123215-1124285 bp Feature: domain Description: Pat_hypo_Ecoli_Z1214_like Location: 1123242-1124157 bp Feature: domain Description: Pat_hypo_Ecoli_Z1214_like Location: 1123 242-1124157 bp Feature: gene Location: 1124436-1124876 bp Feature: domain Description: PHA02517 Location: 1124439-1124841 bp Feature: domain Description: PHA02517 Location: 112443 9-1124841 bp Feature: gene Location: 1125005-1126528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1125278-1126010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1125278-1126010 bp Feature: domain Description: GIIM Note: maturase Location: 1126085-1126283 bp Feature: domain Description: GIIM Note: maturase Location: 1126085-1126283 bp Feature: gene Location: 1127572-1127883 bp Feature: domain Description: InsE Location: 1127575-1127866 bp Feature: domain Description: InsE Location: 1127575-1127866 bp Feature: gene Location: 1127976-1128629 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pat_hypo_Ecoli_Z1214_like (cd07209), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)