myRT

myRT report for GCA_002244295.1_ASM224429v1

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Seq: KZ269253.1 Escherichia coli strain 272-3695 genomic scaffold aervY-supercont1.1, whole genome shotgun sequence (2934111 bp)
Overview 1 RT 1: 2901328-2905852 bp Neighborhood of RT #1 [2901328, 2906001] HTH_33 DDE_3 RVT-AbiP2 PRK09183 COG4584 Feature: gene Location: 2901328-2901714 bp Feature: gene Location: 2901790-2902689 bp Ori: OYA81987.1 Feature: domain Description: HTH_33 Location: 2901952-2902114 bp Feature: domain Description: HTH_33 Location: 2901 952-29021 1 4 bp Feature: domain Description: DDE_3 Location: 2902156-2902585 bp Feature: domain Description: DDE_3 Location: 29021 56-2902585 bp Feature: gene Location: 2902791-2904161 bp Ori: OYA81988.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2903052-2903508 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2903052-2903508 bp Feature: gene Location: 2904200-2904979 bp Ori: OYA81989.1 Feature: domain Description: PRK09183 Location: 2904206-2904977 bp Feature: domain Description: PRK091 83 Location: 2904206-2904977 bp Feature: gene Location: 2904979-2906001 bp Ori: OYA81990.1 Feature: domain Description: COG4584 Location: 2904982-2905852 bp Feature: domain Description: COG4584 Location: 2904982-2905852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2, PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase )

Seq: KZ269257.1 Escherichia coli strain 272-3695 genomic scaffold aervY-supercont1.5, whole genome shotgun sequence (88286 bp)
Overview 1 RT 1: 28278-34032 bp 2 RT 2: 44876-47551 bp Neighborhood of RT #1 [28278, 34052] InsE PHA02517 RVT-GII GIIM rve PRK08181 Neighborhood of RT #2 [44876, 47559] InsE PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 28278-28682 bp Ori: OYA77047.1 Feature: domain Description: InsE Location: 28308-28644 bp Feature: domain Description: InsE Location: 2 8308-2 8644 bp Feature: gene Location: 28711-29067 bp Ori: OYA77048.1 Feature: domain Description: PHA02517 Location: 28714-29023 bp Feature: domain Description: PHA02 517 Location: 2 8714-2 902 3 bp Feature: gene Location: 29184-30707 bp Ori: OYA77049.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29457-30189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9457-30189 bp Feature: domain Description: GIIM Note: maturase Location: 30264-30462 bp Feature: domain Description: GIIM Note: maturase Location: 302 64-30462 bp Feature: gene Location: 31801-33300 bp Ori: OYA77050.1 Feature: domain Description: rve Location: 32173-32566 bp Feature: domain Description: rve Location: 32 173-32 566 bp Feature: gene Location: 33297-34052 bp Ori: OYA77051.1 Feature: domain Description: PRK08181 Location: 33321-34032 bp Feature: domain Description: PRK08181 Location: 3332 1-34032 bp Feature: gene Location: 44876-45202 bp Ori: OYA77064.1 Feature: domain Description: InsE Location: 44879-45200 bp Feature: domain Description: InsE Location: 44879-452 00 bp Feature: gene Location: 45202-45681 bp Ori: OYA77065.1 Feature: domain Description: PHA02517 Location: 45262-45616 bp Feature: domain Description: PHA02 517 Location: 452 62 -45616 bp Feature: gene Location: 46273-46776 bp Ori: OYA77066.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46546-46615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46546-46615 bp Feature: gene Location: 46815-47135 bp Ori: OYA77067.1 Feature: domain Description: PRK10173 Location: 46818-47046 bp Feature: domain Description: PRK10173 Location: 46818-47046 bp Feature: gene Location: 47110-47559 bp Ori: OYA77068.1 Feature: domain Description: PRK10173 Location: 47113-47551 bp Feature: domain Description: PRK10173 Location: 47113-47551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), rve (pfam00665), PRK08181 (transposase; Validated), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)