myRT

myRT report for GCA_002244375.1_ASM224437v1

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Seq: KZ269279.1 Escherichia coli strain 25-462 genomic scaffold aervc-supercont1.2, whole genome shotgun sequence (1232960 bp)
Overview 1 RT 1: 1099768-1106110 bp Neighborhood of RT #1 [1099768, 1106110] PRK11388 RVT-Retrons Feature: gene Location: 1099768-1101687 bp Feature: domain Description: PRK11388 Location: 1099771-1101679 bp Feature: domain Description: PRK1 1 388 Location: 1 099771 -1 1 01 679 bp Feature: gene Location: 1102169-1102408 bp Feature: gene Location: 1102979-1104736 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1103123-1103741 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 031 23-1 1 03741 bp Feature: gene Location: 1104758-1104925 bp Feature: gene Location: 1104983-1106110 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons

Seq: KZ269283.1 Escherichia coli strain 25-462 genomic scaffold aervc-supercont1.6, whole genome shotgun sequence (138917 bp)
Overview 1 RT 1: 123542-127936 bp Neighborhood of RT #1 [123542, 127992] DDE_Tnp_Tn3 PHA02517 RVT-GII GIIM PHA02517 Rve Feature: gene Location: 123542-123715 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 123545-123653 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 12 3545-12 3653 bp Feature: gene Location: 123797-124168 bp Feature: domain Description: PHA02517 Location: 123800-124163 bp Feature: domain Description: PHA02 517 Location: 12 3800-12 4163 bp Feature: gene Location: 124361-125884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124634-125366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 4634-12 5366 bp Feature: domain Description: GIIM Note: maturase Location: 125441-125639 bp Feature: domain Description: GIIM Note: maturase Location: 12 5441-12 5639 bp Feature: gene Location: 126476-126955 bp Feature: domain Description: PHA02517 Location: 126536-126890 bp Feature: domain Description: PHA02 517 Location: 12 6536-12 6890 bp Feature: gene Location: 127288-127992 bp Feature: domain Description: Rve Location: 127291-127936 bp Feature: domain Description: Rve Location: 12 72 91-12 7936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_Tn3 (pfam01526), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Rve (COG3316)