myRT

myRT report for GCA_002244385.1_ASM224438v1

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Seq: KZ269307.1 Escherichia coli strain 25-468 genomic scaffold aervj-supercont1.8, whole genome shotgun sequence (175418 bp)
Overview 1 RT 1: 119549-123943 bp Neighborhood of RT #1 [119549, 123999] DDE_Tnp_Tn3 PHA02517 RVT-GII GIIM PHA02517 Rve Feature: gene Location: 119549-119722 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 119552-119660 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1 1 9552-1 1 9660 bp Feature: gene Location: 119804-120175 bp Feature: domain Description: PHA02517 Location: 119807-120170 bp Feature: domain Description: PHA0251 7 Location: 1 1 9807-1 201 70 bp Feature: gene Location: 120368-121891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120641-121373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 20641 -1 21 373 bp Feature: domain Description: GIIM Note: maturase Location: 121448-121646 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 448-1 21 646 bp Feature: gene Location: 122483-122962 bp Feature: domain Description: PHA02517 Location: 122543-122897 bp Feature: domain Description: PHA0251 7 Location: 1 22543-1 22897 bp Feature: gene Location: 123295-123999 bp Feature: domain Description: Rve Location: 123298-123943 bp Feature: domain Description: Rve Location: 1 23298-1 23943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_Tn3 (pfam01526), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Rve (COG3316)

Seq: KZ269300.1 Escherichia coli strain 25-468 genomic scaffold aervj-supercont1.1, whole genome shotgun sequence (1198602 bp)
Overview 1 RT 1: 1099382-1105724 bp Neighborhood of RT #1 [1099382, 1105724] PRK11388 RVT-Retrons Feature: gene Location: 1099382-1101301 bp Feature: domain Description: PRK11388 Location: 1099385-1101293 bp Feature: domain Description: PRK11388 Location: 1099385-11012 93 bp Feature: gene Location: 1101783-1102022 bp Feature: gene Location: 1102593-1104350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1102737-1103355 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1102 737-1103355 bp Feature: gene Location: 1104372-1104539 bp Feature: gene Location: 1104597-1105724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons