myRT

myRT report for GCA_002244615.1_ASM224461v1

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Seq: KZ269474.1 Escherichia coli strain 25-420 genomic scaffold aerwj-supercont1.6, whole genome shotgun sequence (183641 bp)
Overview 1 RT 1: 156105-160493 bp Neighborhood of RT #1 [156105, 160555] Rve PHA02517 RVT-GII GIIM PHA02517 DDE_Tnp_Tn3 Feature: gene Location: 156105-156809 bp Feature: domain Description: Rve Location: 156108-156753 bp Feature: domain Description: Rve Location: 1 561 08-1 56753 bp Feature: gene Location: 157142-157621 bp Feature: domain Description: PHA02517 Location: 157202-157556 bp Feature: domain Description: PHA0251 7 Location: 1 57202-1 57556 bp Feature: gene Location: 158213-159736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158486-159218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 58486-1 5921 8 bp Feature: domain Description: GIIM Note: maturase Location: 159293-159491 bp Feature: domain Description: GIIM Note: maturase Location: 1 59293-1 59491 bp Feature: gene Location: 159929-160300 bp Feature: domain Description: PHA02517 Location: 159932-160295 bp Feature: domain Description: PHA0251 7 Location: 1 59932-1 60295 bp Feature: gene Location: 160382-160555 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 160385-160493 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1 60385-1 60493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DDE_Tnp_Tn3 (pfam01526)

Seq: KZ269469.1 Escherichia coli strain 25-420 genomic scaffold aerwj-supercont1.1, whole genome shotgun sequence (1481817 bp)
Overview 1 RT 1: 1337515-1343857 bp Neighborhood of RT #1 [1337515, 1343857] PRK11388 RVT-Retrons Feature: gene Location: 1337515-1339434 bp Feature: domain Description: PRK11388 Location: 1337518-1339426 bp Feature: domain Description: PRK11388 Location: 1337518-133942 6 bp Feature: gene Location: 1339916-1340155 bp Feature: gene Location: 1340726-1342483 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1340870-1341488 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1340870-1341488 bp Feature: gene Location: 1342505-1342672 bp Feature: gene Location: 1342730-1343857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons