myRT

myRT report for GCA_002244705.1_ASM224470v1

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Seq: KZ269517.1 Escherichia coli strain 125-1642 genomic scaffold aervE-supercont1.10, whole genome shotgun sequence (114349 bp)
Overview 1 RT 1: 93731-98342 bp 2 RT 2: 109186-112974 bp Neighborhood of RT #1 [93731, 98362] PRK10173 PRK10173 RVT-GII rve PRK08181 Neighborhood of RT #2 [109186, 113012] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 93731-94180 bp Feature: domain Description: PRK10173 Location: 93734-94172 bp Feature: domain Description: PRK1 01 73 Location: 93734-941 72 bp Feature: gene Location: 94155-94475 bp Feature: domain Description: PRK10173 Location: 94158-94386 bp Feature: domain Description: PRK1 01 73 Location: 941 58-94386 bp Feature: gene Location: 94514-95017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94787-94859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94787-94859 bp Feature: gene Location: 96111-97610 bp Feature: domain Description: rve Location: 96483-96876 bp Feature: domain Description: rve Location: 96483-96876 bp Feature: gene Location: 97607-98362 bp Feature: domain Description: PRK08181 Location: 97631-98342 bp Feature: domain Description: PRK081 81 Location: 97631 -98342 bp Feature: gene Location: 109186-109461 bp Feature: domain Description: InsE Location: 109189-109456 bp Feature: domain Description: InsE Location: 1 091 89-1 09456 bp Feature: gene Location: 109512-109991 bp Feature: domain Description: PHA02517 Location: 109572-109926 bp Feature: domain Description: PHA0251 7 Location: 1 09572-1 09926 bp Feature: gene Location: 110583-112106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110856-111588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 0856-1 1 1 588 bp Feature: domain Description: GIIM Note: maturase Location: 111663-111861 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 663-1 1 1 861 bp Feature: gene Location: 112223-112579 bp Feature: domain Description: PHA02517 Location: 112226-112535 bp Feature: domain Description: PHA0251 7 Location: 1 1 2226-1 1 2535 bp Feature: gene Location: 112608-113012 bp Feature: domain Description: InsE Location: 112638-112974 bp Feature: domain Description: InsE Location: 1 1 2638-1 1 2974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, rve (pfam00665), PRK08181 (transposase; Validated), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388)