myRT

myRT report for GCA_002244785.1_ASM224478v1

Download annotations/find similar RTs

Seq: KZ269650.1 Escherichia coli strain 151-1921 genomic scaffold aervP-supercont1.1, whole genome shotgun sequence (2691135 bp)
Overview 1 RT 1: 1193672-1200014 bp 2 RT 2: 1218930-1224086 bp Neighborhood of RT #1 [1193672, 1200014] PRK11388 RVT-Retrons Neighborhood of RT #2 [1218930, 1224109] Tra5 RVT-GII GIIM InsE PRK09692 Feature: gene Location: 1193672-1195591 bp Feature: domain Description: PRK11388 Location: 1193675-1195583 bp Feature: domain Description: PRK1 1 388 Location: 1 1 93675-1 1 95583 bp Feature: gene Location: 1196073-1196312 bp Feature: gene Location: 1196883-1198640 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1197027-1197645 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 97027-1 1 97645 bp Feature: gene Location: 1198662-1198829 bp Feature: gene Location: 1198887-1200014 bp Feature: gene Location: 1218930-1219100 bp Feature: gene Location: 1219418-1219792 bp Feature: domain Description: Tra5 Location: 1219433-1219787 bp Feature: domain Description: Tra5 Location: 1 21 9433-1 21 9787 bp Feature: gene Location: 1219957-1221480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1220230-1220962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 220230-1 220962 bp Feature: domain Description: GIIM Note: maturase Location: 1221037-1221235 bp Feature: domain Description: GIIM Note: maturase Location: 1 221 037-1 221 235 bp Feature: gene Location: 1222539-1222823 bp Feature: domain Description: InsE Location: 1222551-1222812 bp Feature: domain Description: InsE Location: 1 222551 -1 22281 2 bp Feature: gene Location: 1222934-1224109 bp Feature: domain Description: PRK09692 Location: 1222940-1224086 bp Feature: domain Description: PRK09692 Location: 1 222940-1 224086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons, Tra5 (COG2801), RVT-GII, GIIM (pfam08388), InsE (COG2963), PRK09692 (Integrase; provisional)

Seq: KZ269652.1 Escherichia coli strain 151-1921 genomic scaffold aervP-supercont1.3, whole genome shotgun sequence (500470 bp)
Overview 1 RT 1: 476132-480079 bp Neighborhood of RT #1 [476132, 480081] zinc_ribbon_11 PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 476132-476632 bp Feature: domain Description: zinc_ribbon_11 Location: 476249-476567 bp Feature: domain Description: zinc_ribbon_11 Location: 4762 49-476567 bp Feature: gene Location: 476598-477044 bp Feature: domain Description: PHA02517 Location: 476601-477042 bp Feature: domain Description: PHA02 517 Location: 476601-477042 bp Feature: gene Location: 477161-478684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 477434-478166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 477434-478166 bp Feature: domain Description: GIIM Note: maturase Location: 478241-478439 bp Feature: domain Description: GIIM Note: maturase Location: 4782 41-478439 bp Feature: gene Location: 479276-479755 bp Feature: domain Description: PHA02517 Location: 479336-479690 bp Feature: domain Description: PHA02 517 Location: 479336-479690 bp Feature: gene Location: 479755-480081 bp Feature: domain Description: InsE Location: 479758-480079 bp Feature: domain Description: InsE Location: 479758-480079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zinc_ribbon_11 (pfam11682), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: KZ269656.1 Escherichia coli strain 151-1921 genomic scaffold aervP-supercont1.7, whole genome shotgun sequence (116946 bp)
Overview 1 RT 1: 23829-27638 bp 2 RT 2: 38464-43087 bp Neighborhood of RT #1 [23829, 27640] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [38464, 43095] PRK08181 rve RVT-GII PRK10173 PRK10173 Feature: gene Location: 23829-24233 bp Feature: domain Description: InsE Location: 23859-24195 bp Feature: domain Description: InsE Location: 23 859-24195 bp Feature: gene Location: 24262-24618 bp Feature: domain Description: PHA02517 Location: 24265-24574 bp Feature: domain Description: PHA02517 Location: 24265-24574 bp Feature: gene Location: 24735-26258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25008-25740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25008-25740 bp Feature: domain Description: GIIM Note: maturase Location: 25815-26013 bp Feature: domain Description: GIIM Note: maturase Location: 25815-26013 bp Feature: gene Location: 27015-27314 bp Feature: domain Description: PHA02517 Location: 27075-27315 bp Feature: domain Description: PHA02517 Location: 27075-273 15 bp Feature: gene Location: 27314-27640 bp Feature: domain Description: InsE Location: 27317-27638 bp Feature: domain Description: InsE Location: 273 17-2763 8 bp Feature: gene Location: 38464-39219 bp Feature: domain Description: PRK08181 Location: 38488-39199 bp Feature: domain Description: PRK08181 Location: 3 8488-3 9199 bp Feature: gene Location: 39216-40715 bp Feature: domain Description: rve Location: 39588-39981 bp Feature: domain Description: rve Location: 3 9588-3 9981 bp Feature: gene Location: 41809-42312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42082-42154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42082-42154 bp Feature: gene Location: 42351-42671 bp Feature: domain Description: PRK10173 Location: 42354-42582 bp Feature: domain Description: PRK10173 Location: 423 54-42582 bp Feature: gene Location: 42646-43095 bp Feature: domain Description: PRK10173 Location: 42649-43087 bp Feature: domain Description: PRK10173 Location: 42649-43 087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK08181 (transposase; Validated), rve (pfam00665), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)