myRT

myRT report for GCA_002245015.1_ASM224501v1

Download annotations/find similar RTs

Seq: KZ269820.1 Escherichia coli strain 210-2673 genomic scaffold aervx-supercont1.7, whole genome shotgun sequence (172311 bp)
Overview 1 RT 1: 99195-103719 bp Neighborhood of RT #1 [99195, 103868] HTH_33 DDE_3 RVT-AbiP2 PRK09183 COG4584 Feature: gene Location: 99195-99581 bp Feature: gene Location: 99657-100556 bp Ori: OYC41275.1 Feature: domain Description: HTH_33 Location: 99819-99981 bp Feature: domain Description: HTH_33 Location: 9981 9-99981 bp Feature: domain Description: DDE_3 Location: 100023-100452 bp Feature: domain Description: DDE_3 Location: 1 00023-1 00452 bp Feature: gene Location: 100658-102028 bp Ori: OYC41276.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 100919-101375 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 0091 9-1 01 375 bp Feature: gene Location: 102067-102846 bp Ori: OYC41277.1 Feature: domain Description: PRK09183 Location: 102073-102844 bp Feature: domain Description: PRK091 83 Location: 1 02073-1 02844 bp Feature: gene Location: 102846-103868 bp Ori: OYC41278.1 Feature: domain Description: COG4584 Location: 102849-103719 bp Feature: domain Description: COG4584 Location: 1 02849-1 0371 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2, PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase )

Seq: KZ269821.1 Escherichia coli strain 210-2673 genomic scaffold aervx-supercont1.8, whole genome shotgun sequence (114345 bp)
Overview 1 RT 1: 59073-61754 bp 2 RT 2: 72580-78316 bp Neighborhood of RT #1 [59073, 61756] PRK10173 PRK10173 RVT-GII PHA02517 InsE Neighborhood of RT #2 [72580, 78354] PRK08181 rve RVT-GII GIIM PHA02517 InsE Feature: gene Location: 59073-59522 bp Ori: OYC40884.1 Feature: domain Description: PRK10173 Location: 59076-59514 bp Feature: domain Description: PRK10173 Location: 59076-59514 bp Feature: gene Location: 59497-59817 bp Ori: OYC40885.1 Feature: domain Description: PRK10173 Location: 59500-59728 bp Feature: domain Description: PRK10173 Location: 59500-5972 8 bp Feature: gene Location: 59856-60359 bp Ori: OYC40886.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60129-60198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6012 9-60198 bp Feature: gene Location: 60951-61430 bp Ori: OYC40887.1 Feature: domain Description: PHA02517 Location: 61011-61365 bp Feature: domain Description: PHA02 517 Location: 61011-61365 bp Feature: gene Location: 61430-61756 bp Ori: OYC40888.1 Feature: domain Description: InsE Location: 61433-61754 bp Feature: domain Description: InsE Location: 61433-61754 bp Feature: gene Location: 72580-73335 bp Ori: OYC40901.1 Feature: domain Description: PRK08181 Location: 72604-73315 bp Feature: domain Description: PRK08181 Location: 72 604-73315 bp Feature: gene Location: 73332-74831 bp Ori: OYC40902.1 Feature: domain Description: rve Location: 73704-74097 bp Feature: domain Description: rve Location: 73704-74097 bp Feature: gene Location: 75925-77448 bp Ori: OYC40903.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76198-76930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76198-76930 bp Feature: domain Description: GIIM Note: maturase Location: 77005-77203 bp Feature: domain Description: GIIM Note: maturase Location: 77005-772 03 bp Feature: gene Location: 77565-77921 bp Ori: OYC40904.1 Feature: domain Description: PHA02517 Location: 77568-77877 bp Feature: domain Description: PHA02 517 Location: 77568-77877 bp Feature: gene Location: 77950-78354 bp Ori: OYC40905.1 Feature: domain Description: InsE Location: 77980-78316 bp Feature: domain Description: InsE Location: 77980-78316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), PRK08181 (transposase; Validated), rve (pfam00665), GIIM (pfam08388)