myRT

myRT report for GCA_002245075.1_ASM224507v1

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Seq: KZ269853.1 Escherichia coli strain 225-2935 genomic scaffold aervW-supercont1.11, whole genome shotgun sequence (109970 bp)
Overview 1 RT 1: 1-2158 bp 2 RT 2: 95704-100315 bp Neighborhood of RT #1 [1, 2196] RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [95704, 100335] PRK10173 PRK10173 RVT-GII rve PRK08181 Feature: gene Location: 1-1290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40-772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40-772 bp Feature: domain Description: GIIM Note: maturase Location: 847-1045 bp Feature: domain Description: GIIM Note: maturase Location: 847-1 045 bp Feature: gene Location: 1407-1763 bp Feature: domain Description: PHA02517 Location: 1410-1719 bp Feature: domain Description: PHA0251 7 Location: 1 41 0-1 71 9 bp Feature: gene Location: 1792-2196 bp Feature: domain Description: InsE Location: 1822-2158 bp Feature: domain Description: InsE Location: 1 822-21 58 bp Feature: gene Location: 95704-96153 bp Feature: domain Description: PRK10173 Location: 95707-96145 bp Feature: domain Description: PRK1 01 73 Location: 95707-961 45 bp Feature: gene Location: 96128-96448 bp Feature: domain Description: PRK10173 Location: 96131-96359 bp Feature: domain Description: PRK1 01 73 Location: 961 31 -96359 bp Feature: gene Location: 96487-96990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96760-96832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96760-96832 bp Feature: gene Location: 98084-99583 bp Feature: domain Description: rve Location: 98456-98849 bp Feature: domain Description: rve Location: 98456-98849 bp Feature: gene Location: 99580-100335 bp Feature: domain Description: PRK08181 Location: 99604-100315 bp Feature: domain Description: PRK081 81 Location: 99604-1 0031 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), rve (pfam00665), PRK08181 (transposase; Validated)