myRT

myRT report for GCA_002245165.1_ASM224516v1

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Seq: KZ269896.1 Escherichia coli strain 25-367 genomic scaffold aerwn-supercont1.6, whole genome shotgun sequence (183764 bp)
Overview 1 RT 1: 155293-159687 bp Neighborhood of RT #1 [155293, 159743] DDE_Tnp_Tn3 PHA02517 RVT-GII GIIM PHA02517 Rve Feature: gene Location: 155293-155466 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 155296-155404 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1 55296-1 55404 bp Feature: gene Location: 155548-155919 bp Feature: domain Description: PHA02517 Location: 155551-155914 bp Feature: domain Description: PHA0251 7 Location: 1 55551 -1 5591 4 bp Feature: gene Location: 156112-157635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156385-157117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 56385-1 571 1 7 bp Feature: domain Description: GIIM Note: maturase Location: 157192-157390 bp Feature: domain Description: GIIM Note: maturase Location: 1 571 92-1 57390 bp Feature: gene Location: 158227-158706 bp Feature: domain Description: PHA02517 Location: 158287-158641 bp Feature: domain Description: PHA0251 7 Location: 1 58287-1 58641 bp Feature: gene Location: 159039-159743 bp Feature: domain Description: Rve Location: 159042-159687 bp Feature: domain Description: Rve Location: 1 59042-1 59687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_Tn3 (pfam01526), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Rve (COG3316)

Seq: KZ269891.1 Escherichia coli strain 25-367 genomic scaffold aerwn-supercont1.1, whole genome shotgun sequence (2651007 bp)
Overview 1 RT 1: 1102681-1109023 bp Neighborhood of RT #1 [1102681, 1109023] PRK11388 RVT-Retrons Feature: gene Location: 1102681-1104600 bp Feature: domain Description: PRK11388 Location: 1102684-1104592 bp Feature: domain Description: PRK11388 Location: 1102 684-1104592 bp Feature: gene Location: 1105082-1105321 bp Feature: gene Location: 1105892-1107649 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1106036-1106654 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1106036-1106654 bp Feature: gene Location: 1107671-1107838 bp Feature: gene Location: 1107896-1109023 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons