myRT

myRT report for GCA_002245495.1_ASM224549v1

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Seq: NQJF01000024.1 Oceanimonas baumannii strain ATCC 700832 NODE_24_length_16282_cov_154.924, whole genome shotgun sequence (16282 bp)
Overview 1 RT 1: 7899-12685 bp Neighborhood of RT #1 [7899, 12685] guaA Arm-DNA-bind_3 INT_P4_C RVT-Retrons HTH_XRE Feature: gene Location: 7899-9476 bp Ori: OYD21041.1 Feature: domain Description: guaA Location: 7917-9474 bp Feature: domain Description: guaA Location: 791 7-9474 bp Feature: gene Location: 9784-10971 bp Ori: OYD21042.1 Feature: domain Description: Arm-DNA-bind_3 Location: 9790-10048 bp Feature: domain Description: Arm-DNA-bind_3 Location: 9790-1 0048 bp Feature: domain Description: INT_P4_C Location: 10399-10954 bp Feature: domain Description: INT_P4_C Location: 1 0399-1 0954 bp Feature: gene Location: 10994-12133 bp Ori: OYD21043.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11132-11684 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 1 32-1 1 684 bp Feature: gene Location: 12117-12404 bp Ori: OYD21044.1 Feature: domain Description: HTH_XRE Location: 12132-12297 bp Feature: domain Description: HTH_XRE Location: 1 21 32-1 2297 bp Feature: gene Location: 12467-12685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT guaA (PRK00074), Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-Retrons, HTH_XRE (smart00530)

Seq: NQJF01000008.1 Oceanimonas baumannii strain ATCC 700832 NODE_8_length_217283_cov_125.841, whole genome shotgun sequence (217283 bp)
Overview 1 RT 1: 212235-216686 bp Neighborhood of RT #1 [212235, 216709] RVT-Retrons reg_near_HchA Feature: gene Location: 212235-212563 bp Feature: gene Location: 213141-213326 bp Feature: gene Location: 213442-215280 bp Ori: OYD24013.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 213577-214273 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 13577-2 142 73 bp Feature: gene Location: 215693-215890 bp Feature: gene Location: 216062-216709 bp Ori: OYD24014.1 Feature: domain Description: reg_near_HchA Location: 216533-216686 bp Feature: domain Description: reg_near_HchA Location: 2 16533-2 16686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, reg_near_HchA (TIGR03541)

Seq: NQJF01000038.1 Oceanimonas baumannii strain ATCC 700832 NODE_38_length_1355_cov_2.52524, whole genome shotgun sequence (1052 bp)
Overview 1 RT 1: 1-484 bp Neighborhood of RT #1 [1, 1052] RVT-CRISPR-like Feature: gene Location: 1-1052 bp Ori: OYD20082.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 142-484 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 142-484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: NQJF01000005.1 Oceanimonas baumannii strain ATCC 700832 NODE_5_length_252979_cov_123.733, whole genome shotgun sequence (252979 bp)
Overview 1 RT 1: 360-2591 bp Neighborhood of RT #1 [360, 2591] RVT-Retrons Feature: gene Location: 360-1556 bp Ori: OYD24886.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 504-1089 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 504 -1089 bp Feature: gene Location: 1913-2185 bp Feature: gene Location: 2262-2591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons