myRT

myRT report for GCA_002246035.1_ASM224603v1

Download annotations/find similar RTs

Seq: NPZE01000003.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCTRPRTH04 65-CTR059-F09_NODE_31.ctg_1, whole genome shotgun sequence (38994 bp)
Overview 1 RT 1: 5783-9985 bp Neighborhood of RT #1 [5783, 10002] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Feature: gene Location: 5783-6454 bp Feature: domain Description: Plasmid_stab_B Location: 5798-6005 bp Feature: domain Description: Plasmid_stab_B Location: 5798-6005 bp Feature: domain Description: Plasmid_stab_B Location: 6110-6317 bp Feature: domain Description: Plasmid_stab_B Location: 61 1 0-631 7 bp Feature: gene Location: 6457-7428 bp Feature: domain Description: StbA Location: 6460-7405 bp Feature: domain Description: StbA Location: 6460-7405 bp Feature: gene Location: 7677-9161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8079-8769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8079-8769 bp Feature: gene Location: 9161-9412 bp Feature: gene Location: 9571-10002 bp Feature: domain Description: PRK10276 Location: 9622-9985 bp Feature: domain Description: PRK1 0276 Location: 9622-9985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NPZE01000043.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCTRPRTH04 65-CTR059-F09_NODE_7.ctg_1, whole genome shotgun sequence (225708 bp)
Overview 1 RT 1: 163760-170164 bp Neighborhood of RT #1 [163760, 170164] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 163760-163990 bp Feature: gene Location: 164873-167149 bp Feature: domain Description: AAA_15 Location: 164906-165914 bp Feature: domain Description: AAA_15 Location: 164906-165914 bp Feature: gene Location: 167264-168364 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 167447-167975 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 167447-167975 bp Feature: gene Location: 169020-169514 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 169164-169338 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 169164-169338 bp Feature: gene Location: 169886-170164 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)