myRT

myRT report for GCA_002246235.1_ASM224623v1

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Seq: NPZS01000048.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH20 42-CREI003-5_NODE_63.ctg_1, whole genome shotgun sequence (1773 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1773] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1773 bp Ori: OYE70003.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1 442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NPZS01000043.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH20 42-CREI003-5_NODE_13.ctg_1, whole genome shotgun sequence (142058 bp)
Overview 1 RT 1: 25562-29818 bp Neighborhood of RT #1 [25562, 29832] PRK10724 SmpB RVT-UG11 PRK09678 D Feature: gene Location: 25562-26038 bp Ori: OYE70266.1 Feature: domain Description: PRK10724 Location: 25568-26033 bp Feature: domain Description: PRK1072 4 Location: 2 5568-2 6033 bp Feature: gene Location: 26149-26631 bp Ori: OYE70267.1 Feature: domain Description: SmpB Location: 26179-26623 bp Feature: domain Description: SmpB Location: 2 6179-2 662 3 bp Feature: gene Location: 27246-28019 bp Ori: OYE70268.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27381-27834 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 7381-2 7834 bp Feature: gene Location: 28423-28641 bp Ori: OYE70269.1 Feature: domain Description: PRK09678 Location: 28426-28624 bp Feature: domain Description: PRK09678 Location: 2 842 6-2 862 4 bp Feature: gene Location: 28732-29832 bp Ori: OYE70270.1 Feature: domain Description: D Location: 28747-29818 bp Feature: domain Description: D Location: 2 8747-2 9818 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional), D (PHA02561)

Seq: NPZS01000072.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH20 42-CREI003-5_NODE_8.ctg_1, whole genome shotgun sequence (279597 bp)
Overview 1 RT 1: 274669-278854 bp Neighborhood of RT #1 [274669, 279171] SLATT_5 RVT-UG17 CoiA Feature: gene Location: 274669-275349 bp Feature: gene Location: 276194-276733 bp Ori: OYE67788.1 Feature: domain Description: SLATT_5 Location: 276200-276713 bp Feature: domain Description: SLATT_5 Location: 276200-276713 bp Feature: gene Location: 276723-278093 bp Ori: OYE67789.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 276951-277557 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 276951-277557 bp Feature: gene Location: 278467-279171 bp Ori: OYE67790.1 Feature: domain Description: CoiA Location: 278524-278854 bp Feature: domain Description: CoiA Location: 278524-278854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, CoiA (pfam06054)

Seq: NPZS01000036.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH20 42-CREI003-5_NODE_4.ctg_1, whole genome shotgun sequence (380492 bp)
Overview 1 RT 1: 97686-104090 bp Neighborhood of RT #1 [97686, 104090] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 97686-97916 bp Feature: gene Location: 98799-101075 bp Ori: OYE72013.1 Feature: domain Description: AAA_15 Location: 98832-99840 bp Feature: domain Description: AAA_15 Location: 98832-9984 0 bp Feature: gene Location: 101190-102290 bp Ori: OYE72014.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101370-101904 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101370-101904 bp Feature: gene Location: 102946-103440 bp Ori: OYE72238.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 103090-103264 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 103090-103264 bp Feature: gene Location: 103812-104090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)