myRT

myRT report for GCA_002246245.1_ASM224624v1

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Seq: NPZQ01000050.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH18 40-CREI003-1_NODE_5.ctg_1, whole genome shotgun sequence (279962 bp)
Overview 1 RT 1: 275034-279219 bp Neighborhood of RT #1 [275034, 279536] SLATT_5 RVT-UG17 CoiA Feature: gene Location: 275034-275714 bp Feature: gene Location: 276559-277098 bp Ori: OYE87221.1 Feature: domain Description: SLATT_5 Location: 276565-277078 bp Feature: domain Description: SLATT_5 Location: 276565-277078 bp Feature: gene Location: 277088-278458 bp Ori: OYE87222.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 277316-277922 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 27731 6-277922 bp Feature: gene Location: 278832-279536 bp Ori: OYE87223.1 Feature: domain Description: CoiA Location: 278889-279219 bp Feature: domain Description: CoiA Location: 278889-27921 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, CoiA (pfam06054)

Seq: NPZQ01000075.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH18 40-CREI003-1_NODE_8.ctg_1, whole genome shotgun sequence (229420 bp)
Overview 1 RT 1: 97686-104090 bp Neighborhood of RT #1 [97686, 104090] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 97686-97916 bp Feature: gene Location: 98799-101075 bp Ori: OYE83882.1 Feature: domain Description: AAA_15 Location: 98832-99840 bp Feature: domain Description: AAA_15 Location: 98832 -99840 bp Feature: gene Location: 101190-102290 bp Ori: OYE83883.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101370-101904 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101370-101904 bp Feature: gene Location: 102946-103440 bp Ori: OYE83984.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 103090-103264 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 103090-1032 64 bp Feature: gene Location: 103812-104090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: NPZQ01000028.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH18 40-CREI003-1_NODE_65.ctg_1, whole genome shotgun sequence (1850 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Ori: OYE88295.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NPZQ01000049.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH18 40-CREI003-1_NODE_17.ctg_1, whole genome shotgun sequence (142363 bp)
Overview 1 RT 1: 25562-29818 bp Neighborhood of RT #1 [25562, 29832] PRK10724 SmpB RVT-UG11 PRK09678 D Feature: gene Location: 25562-26038 bp Ori: OYE87339.1 Feature: domain Description: PRK10724 Location: 25568-26033 bp Feature: domain Description: PRK10724 Location: 25568-26033 bp Feature: gene Location: 26149-26631 bp Ori: OYE87340.1 Feature: domain Description: SmpB Location: 26179-26623 bp Feature: domain Description: SmpB Location: 26179-26623 bp Feature: gene Location: 27246-28019 bp Ori: OYE87341.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27381-27834 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27381-27834 bp Feature: gene Location: 28423-28641 bp Ori: OYE87342.1 Feature: domain Description: PRK09678 Location: 28426-28624 bp Feature: domain Description: PRK09678 Location: 284 26-28624 bp Feature: gene Location: 28732-29832 bp Ori: OYE87343.1 Feature: domain Description: D Location: 28747-29818 bp Feature: domain Description: D Location: 2874 7-29818 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional), D (PHA02561)