myRT

myRT report for GCA_002246395.1_ASM224639v1

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Seq: NQAC01000061.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH30 NODE_62_length_12607_cov_64.5579_ID_123.ctg_1, whole genome shotgun sequence (12607 bp)
Overview 1 RT 1: 4996-12344 bp Neighborhood of RT #1 [4996, 12394] FimC FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 4996-5760 bp Ori: OYF47858.1 Feature: domain Description: FimC Location: 5041-5743 bp Feature: domain Description: FimC Location: 5041 -5743 bp Feature: gene Location: 5807-8401 bp Ori: OYF47859.1 Feature: domain Description: FimD Location: 5849-8390 bp Feature: domain Description: FimD Location: 5849-8390 bp Feature: gene Location: 8398-10479 bp Ori: OYF47860.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 8809-9253 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 8809-9253 bp Feature: gene Location: 10470-10929 bp Feature: domain Description: Integrase_1 Location: 10491-10758 bp Feature: domain Description: Integrase_1 Location: 1 0491 -1 0758 bp Feature: gene Location: 11156-12394 bp Feature: domain Description: PRK09692 Location: 11162-12344 bp Feature: domain Description: PRK09692 Location: 1 1 1 62-1 2344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)

Seq: NQAC01000058.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH30 NODE_81_length_1892_cov_268.648_ID_161.ctg_1, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1794 bp Neighborhood of RT #1 [59, 1794] RVT-GII Feature: gene Location: 59-1543 bp Ori: OYF48013.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: gene Location: 1543-1794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII