myRT

myRT report for GCA_002246415.1_ASM224641v1

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Seq: NQAB01000069.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH29 NODE_80_length_1892_cov_281.817_ID_159.ctg_1, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1794 bp Neighborhood of RT #1 [59, 1794] RVT-GII Feature: gene Location: 59-1543 bp Ori: OYF54373.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 -1 1 51 bp Feature: gene Location: 1543-1794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NQAB01000078.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH29 NODE_35_length_43842_cov_66.5867_ID_69.ctg_1, whole genome shotgun sequence (43842 bp)
Overview 1 RT 1: 4996-12344 bp Neighborhood of RT #1 [4996, 12394] FimC FimD RVT-UG4 Integrase_1 PRK09692 Feature: gene Location: 4996-5760 bp Ori: OYF53570.1 Feature: domain Description: FimC Location: 5041-5743 bp Feature: domain Description: FimC Location: 5041-5743 bp Feature: gene Location: 5807-8401 bp Ori: OYF53571.1 Feature: domain Description: FimD Location: 5849-8390 bp Feature: domain Description: FimD Location: 5849-8390 bp Feature: gene Location: 8398-10479 bp Ori: OYF53572.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 8809-9253 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 8809-92 53 bp Feature: gene Location: 10470-10929 bp Feature: domain Description: Integrase_1 Location: 10491-10758 bp Feature: domain Description: Integrase_1 Location: 10491-10758 bp Feature: gene Location: 11156-12394 bp Feature: domain Description: PRK09692 Location: 11162-12344 bp Feature: domain Description: PRK09692 Location: 11162 -12 344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional)