myRT

myRT report for GCA_002246555.1_ASM224655v1

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Seq: NQAL01000073.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCTRPRTH02 63-CTR018-F04_NODE_6.ctg_1, whole genome shotgun sequence (225735 bp)
Overview 1 RT 1: 55558-61962 bp Neighborhood of RT #1 [55558, 61962] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 55558-55836 bp Feature: gene Location: 56208-56702 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 56352-56526 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 56352-56526 bp Feature: gene Location: 57358-58458 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 57541-58069 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 57541 -58069 bp Feature: gene Location: 58573-60849 bp Feature: domain Description: AAA_15 Location: 58606-59614 bp Feature: domain Description: AAA_1 5 Location: 58606-5961 4 bp Feature: gene Location: 61732-61962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)

Seq: NQAL01000050.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCTRPRTH02 63-CTR018-F04_NODE_31.ctg_1, whole genome shotgun sequence (38994 bp)
Overview 1 RT 1: 5783-9985 bp Neighborhood of RT #1 [5783, 10002] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 Feature: gene Location: 5783-6454 bp Feature: domain Description: Plasmid_stab_B Location: 5798-6005 bp Feature: domain Description: Plasmid_stab_B Location: 5798-6005 bp Feature: domain Description: Plasmid_stab_B Location: 6110-6317 bp Feature: domain Description: Plasmid_stab_B Location: 6110-6317 bp Feature: gene Location: 6457-7428 bp Feature: domain Description: StbA Location: 6460-7405 bp Feature: domain Description: StbA Location: 6460-7405 bp Feature: gene Location: 7677-9161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8079-8769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8079-8769 bp Feature: gene Location: 9161-9412 bp Feature: gene Location: 9571-10002 bp Feature: domain Description: PRK10276 Location: 9622-9985 bp Feature: domain Description: PRK102 76 Location: 962 2 -9985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)