myRT

myRT report for GCA_002246635.1_ASM224663v1

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Seq: NPZR01000066.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH19 41-CREI003-4_NODE_4.ctg_1, whole genome shotgun sequence (353653 bp)
Overview 1 RT 1: 97527-103931 bp Neighborhood of RT #1 [97527, 103931] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 97527-97757 bp Feature: gene Location: 98640-100916 bp Ori: OYE90694.1 Feature: domain Description: AAA_15 Location: 98673-99681 bp Feature: domain Description: AAA_1 5 Location: 98673-99681 bp Feature: gene Location: 101031-102131 bp Ori: OYE90695.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101211-101745 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 01 21 1 -1 01 745 bp Feature: gene Location: 102787-103281 bp Ori: OYE90896.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 102931-103105 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1 02931 -1 031 05 bp Feature: gene Location: 103653-103931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: NPZR01000012.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH19 41-CREI003-4_NODE_7.ctg_1, whole genome shotgun sequence (279597 bp)
Overview 1 RT 1: 274669-278854 bp Neighborhood of RT #1 [274669, 279171] SLATT_5 RVT-UG17 CoiA Feature: gene Location: 274669-275349 bp Feature: gene Location: 276194-276733 bp Ori: OYF02133.1 Feature: domain Description: SLATT_5 Location: 276200-276713 bp Feature: domain Description: SLATT_5 Location: 2 762 00-2 76713 bp Feature: gene Location: 276723-278093 bp Ori: OYF02134.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 276951-277557 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 76951-2 77557 bp Feature: gene Location: 278467-279171 bp Ori: OYF02135.1 Feature: domain Description: CoiA Location: 278524-278854 bp Feature: domain Description: CoiA Location: 2 7852 4-2 78854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, CoiA (pfam06054)

Seq: NPZR01000076.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH19 41-CREI003-4_NODE_63.ctg_1, whole genome shotgun sequence (1773 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1773] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1773 bp Ori: OYE89795.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NPZR01000047.1 Klebsiella pneumoniae subsp. pneumoniae strain KPCRETH19 41-CREI003-4_NODE_14.ctg_1, whole genome shotgun sequence (142363 bp)
Overview 1 RT 1: 25562-29818 bp Neighborhood of RT #1 [25562, 29832] PRK10724 SmpB RVT-UG11 PRK09678 D Feature: gene Location: 25562-26038 bp Ori: OYE93960.1 Feature: domain Description: PRK10724 Location: 25568-26033 bp Feature: domain Description: PRK10724 Location: 25568-26033 bp Feature: gene Location: 26149-26631 bp Ori: OYE93961.1 Feature: domain Description: SmpB Location: 26179-26623 bp Feature: domain Description: SmpB Location: 26179-26623 bp Feature: gene Location: 27246-28019 bp Ori: OYE93962.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27381-27834 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27381-27834 bp Feature: gene Location: 28423-28641 bp Ori: OYE93963.1 Feature: domain Description: PRK09678 Location: 28426-28624 bp Feature: domain Description: PRK09678 Location: 284 26-28624 bp Feature: gene Location: 28732-29832 bp Ori: OYE93964.1 Feature: domain Description: D Location: 28747-29818 bp Feature: domain Description: D Location: 2874 7-29818 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional), D (PHA02561)