myRT

myRT report for GCA_002247665.1_ASM224766v1

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Seq: NQBQ01000027.1 Klebsiella pneumoniae subsp. pneumoniae strain KPSW+03 105-ESBL-VC41_NODE_70.ctg_1, whole genome shotgun sequence (4197 bp)
Overview 1 RT 1: 832-3494 bp Neighborhood of RT #1 [832, 3520] RVT-Retrons DUF5375 Pox_D5 Feature: gene Location: 832-1023 bp Feature: gene Location: 1025-1699 bp Feature: gene Location: 1700-3196 bp Ori: OYI23619.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2405-2960 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2405-2960 bp Feature: gene Location: 3192-3322 bp Feature: domain Description: DUF5375 Location: 3207-3267 bp Feature: domain Description: DUF5375 Location: 3207-3267 bp Feature: gene Location: 3329-3520 bp Ori: OYI23621.1 Feature: domain Description: Pox_D5 Location: 3332-3494 bp Feature: domain Description: Pox_D5 Location: 3332-3494 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DUF5375 (pfam17345), Pox_D5 (pfam03288)

Seq: NQBQ01000044.1 Klebsiella pneumoniae subsp. pneumoniae strain KPSW+03 105-ESBL-VC41_NODE_26.ctg_1, whole genome shotgun sequence (79847 bp)
Overview 1 RT 1: 38516-42513 bp Neighborhood of RT #1 [38516, 42663] PRK09692 PRK09692 SLATT_5 RVT-UG17 Psu Feature: gene Location: 38516-39489 bp Feature: domain Description: PRK09692 Location: 38525-38888 bp Feature: domain Description: PRK09692 Location: 3852 5-38888 bp Feature: domain Description: PRK09692 Location: 38894-39281 bp Feature: domain Description: PRK09692 Location: 38894-392 81 bp Feature: gene Location: 39542-40183 bp Ori: OYI20989.1 Feature: domain Description: SLATT_5 Location: 39545-40148 bp Feature: domain Description: SLATT_5 Location: 39545-40148 bp Feature: gene Location: 40378-41787 bp Ori: OYI20953.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 40615-41227 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 40615-412 2 7 bp Feature: gene Location: 41969-42104 bp Feature: gene Location: 42114-42663 bp Feature: domain Description: Psu Location: 42132-42513 bp Feature: domain Description: Psu Location: 42 132 -42 513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455)

Seq: NQBQ01000083.1 Klebsiella pneumoniae subsp. pneumoniae strain KPSW+03 105-ESBL-VC41_NODE_58.ctg_1, whole genome shotgun sequence (10470 bp)
Overview 1 RT 1: 1190-4384 bp Neighborhood of RT #1 [1190, 4398] RVT-GII PRK10276 Feature: gene Location: 1190-1402 bp Feature: gene Location: 1572-1802 bp Feature: gene Location: 2036-3568 bp Ori: OYI17382.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2438-3176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243 8-3 176 bp Feature: gene Location: 3568-3819 bp Feature: gene Location: 3973-4398 bp Ori: OYI17384.1 Feature: domain Description: PRK10276 Location: 3976-4384 bp Feature: domain Description: PRK10276 Location: 3 976-43 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)