myRT

myRT report for GCA_002247865.1_ASM224786v1

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Seq: NQCE01000055.1 Klebsiella pneumoniae subsp. pneumoniae strain KPH+01 120-HLP91_NODE_48.ctg_1, whole genome shotgun sequence (13084 bp)
Overview 1 RT 1: 7706-11546 bp Neighborhood of RT #1 [7706, 11566] INT_Cre_C RVT-GII HHA Feature: gene Location: 7706-8023 bp Feature: gene Location: 8089-9225 bp Ori: OYI89733.1 Feature: domain Description: INT_Cre_C Location: 8512-9166 bp Feature: domain Description: INT_Cre_C Location: 851 2-91 66 bp Feature: gene Location: 9311-10795 bp Ori: OYI89734.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9713-10403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 971 3-1 0403 bp Feature: gene Location: 10853-11047 bp Feature: gene Location: 11312-11566 bp Ori: OYI89736.1 Feature: domain Description: HHA Location: 11363-11546 bp Feature: domain Description: HHA Location: 1 1 363-1 1 546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)

Seq: NQCE01000067.1 Klebsiella pneumoniae subsp. pneumoniae strain KPH+01 120-HLP91_NODE_24.ctg_1, whole genome shotgun sequence (88813 bp)
Overview 1 RT 1: 5676-8884 bp Neighborhood of RT #1 [5676, 8884] PRK10276 RVT-GII Feature: gene Location: 5676-6101 bp Ori: OYI87702.1 Feature: domain Description: PRK10276 Location: 5679-6087 bp Feature: domain Description: PRK102 76 Location: 5679-6087 bp Feature: gene Location: 6255-6506 bp Feature: gene Location: 6506-8038 bp Ori: OYI87704.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6908-7646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6908-7646 bp Feature: gene Location: 8272-8502 bp Feature: gene Location: 8672-8884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: NQCE01000006.1 Klebsiella pneumoniae subsp. pneumoniae strain KPH+01 120-HLP91_NODE_20.ctg_1, whole genome shotgun sequence (100078 bp)
Overview 1 RT 1: 26128-31316 bp Neighborhood of RT #1 [26128, 31316] SmpB PRK09692 RVT-UG7 Feature: gene Location: 26128-26610 bp Ori: OYI98284.1 Feature: domain Description: SmpB Location: 26158-26602 bp Feature: domain Description: SmpB Location: 26158-26602 bp Feature: gene Location: 27301-28500 bp Ori: OYI98285.1 Feature: domain Description: PRK09692 Location: 27304-28492 bp Feature: domain Description: PRK09692 Location: 273 04-28492 bp Feature: gene Location: 28503-30131 bp Ori: OYI98286.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 28911-29340 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 28911-293 40 bp Feature: gene Location: 30128-30865 bp Feature: gene Location: 31125-31316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SmpB (pfam01668), PRK09692 (Integrase; provisional), RVT-UG7