myRT

myRT report for GCA_002248085.2_ASM224808v2

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Seq: NQCV02000004.1 Klebsiella quasipneumoniae subsp. similipneumoniae strain KPCTRSRTH04 KPCTRSRTH04_contig_4, whole genome shotgun sequence (120494 bp)
Overview 1 RT 1: 13082-17886 bp Neighborhood of RT #1 [13082, 18494] RVT-GII InsE InsE InsE PHA02517 HTH_28 rve Feature: gene Location: 13082-13396 bp Feature: gene Location: 13463-13702 bp Feature: gene Location: 13835-15319 bp Ori: TNJ96675.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14237-14927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4237-1 4927 bp Feature: gene Location: 15470-17002 bp Ori: TNJ96584.1 Feature: domain Description: InsE Location: 15476-15614 bp Feature: domain Description: InsE Location: 1 5476-1 561 4 bp Feature: domain Description: InsE Location: 15638-15770 bp Feature: domain Description: InsE Location: 1 5638-1 5770 bp Feature: domain Description: InsE Location: 15815-16148 bp Feature: domain Description: InsE Location: 1 581 5-1 61 48 bp Feature: domain Description: PHA02517 Location: 16205-16973 bp Feature: domain Description: PHA0251 7 Location: 1 6205-1 6973 bp Feature: gene Location: 17091-18494 bp Ori: TNJ96585.1 Feature: domain Description: HTH_28 Location: 17139-17289 bp Feature: domain Description: HTH_28 Location: 1 71 39-1 7289 bp Feature: domain Description: rve Location: 17520-17886 bp Feature: domain Description: rve Location: 1 7520-1 7886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), HTH_28 (pfam13518), rve (pfam00665)

Seq: NQCV02000001.1 Klebsiella quasipneumoniae subsp. similipneumoniae strain KPCTRSRTH04 KPCTRSRTH04_contig_1, whole genome shotgun sequence (2810978 bp)
Overview 1 RT 1: 1226886-1236747 bp Neighborhood of RT #1 [1226886, 1236747] mutS1 INT_Rci_Hp1_C INT_P4_C RVT-UG3 HTH_Tnp_1 Tra5 RVT-UG3 RVT-UG8 Feature: gene Location: 1226886-1229453 bp Ori: TNK08573.1 Gene: mutS Feature: domain Description: mutS1 Location: 1226922-1229442 bp Feature: domain Description: mutS1 Location: 12 2 692 2 -12 2 9442 bp Feature: gene Location: 1229641-1231074 bp Ori: TNK07128.1 Feature: domain Description: INT_Rci_Hp1_C Location: 1229989-1230196 bp Feature: domain Description: INT_Rci_Hp1_C Location: 12 2 9989-12 30196 bp Feature: domain Description: INT_P4_C Location: 1230412-1230949 bp Feature: domain Description: INT_P4_C Location: 12 30412 -12 30949 bp Feature: gene Location: 1231071-1231556 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1231353-1231557 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 12 31353-12 31557 bp Feature: gene Location: 1231610-1231924 bp Ori: TNK07129.1 Feature: domain Description: HTH_Tnp_1 Location: 1231640-1231829 bp Feature: domain Description: HTH_Tnp_1 Location: 12 31640-12 3182 9 bp Feature: gene Location: 1231921-1232742 bp Ori: TNK07130.1 Feature: domain Description: Tra5 Location: 1231975-1232731 bp Feature: domain Description: Tra5 Location: 12 31975-12 32 731 bp Feature: gene Location: 1232771-1233550 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1232774-1233065 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 12 32 774-12 33065 bp Feature: gene Location: 1233547-1235565 bp Ori: TNK07131.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1234117-1234567 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 12 34117-12 34567 bp Feature: gene Location: 1235831-1236430 bp Feature: gene Location: 1236445-1236747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mutS1 (TIGR01070), INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), RVT-UG3, HTH_Tnp_1 (pfam01527), Tra5 (COG2801), RVT-UG8