myRT

myRT report for GCA_002248305.1_ASM224830v1

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Seq: NQDP01000029.1 Shigella sonnei strain ECPUTH05 148-ESBL-SIUE-6_NODE_8.ctg_1, whole genome shotgun sequence (182533 bp)
Overview 1 RT 1: 130919-134799 bp Neighborhood of RT #1 [130919, 134804] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 130919-131635 bp Feature: domain Description: rph Location: 130922-131630 bp Feature: domain Description: rph Location: 1 30922-1 31 630 bp Feature: gene Location: 131702-132343 bp Feature: domain Description: pyrE Location: 131705-132338 bp Feature: domain Description: pyrE Location: 1 31 705-1 32338 bp Feature: gene Location: 132641-133600 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132776-133325 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 32776-1 33325 bp Feature: gene Location: 133646-134242 bp Feature: domain Description: slmA Location: 133652-134228 bp Feature: domain Description: slmA Location: 1 33652-1 34228 bp Feature: gene Location: 134349-134804 bp Feature: domain Description: dut Location: 134352-134799 bp Feature: domain Description: dut Location: 1 34352-1 34799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: NQDP01000169.1 Shigella sonnei strain ECPUTH05 148-ESBL-SIUE-6_NODE_7.ctg_1, whole genome shotgun sequence (192993 bp)
Overview 1 RT 1: 8220-13277 bp Neighborhood of RT #1 [8220, 13279] Caudo_TAP RVT-Retrons TIR_2 PRK10597 prfC Feature: gene Location: 8220-8804 bp Feature: domain Description: Caudo_TAP Location: 8436-8793 bp Feature: domain Description: Caudo_TAP Location: 8436-8793 bp Feature: gene Location: 8791-9111 bp Feature: gene Location: 9249-10853 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9540-10131 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9540-10131 bp Feature: domain Description: TIR_2 Location: 10458-10746 bp Feature: domain Description: TIR_2 Location: 10458-10746 bp Feature: gene Location: 11213-11473 bp Feature: domain Description: PRK10597 Location: 11216-11456 bp Feature: domain Description: PRK10597 Location: 112 16-11456 bp Feature: gene Location: 11693-13279 bp Feature: domain Description: prfC Location: 11711-13277 bp Feature: domain Description: prfC Location: 11711-132 77 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), prfC (TIGR00503), Caudo_TAP (pfam02413), RVT-Retrons, TIR_2 (pfam13676)