myRT

myRT report for GCA_002248525.1_ASM224852v1

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Seq: NQEG01000041.1 Klebsiella pneumoniae strain KPPUTH07 165-ESBL-SIUK-16_NODE_15.ctg_1, whole genome shotgun sequence (142363 bp)
Overview 1 RT 1: 25562-29818 bp Neighborhood of RT #1 [25562, 29832] PRK10724 SmpB RVT-UG11 PRK09678 D Feature: gene Location: 25562-26038 bp Ori: OYL93054.1 Feature: domain Description: PRK10724 Location: 25568-26033 bp Feature: domain Description: PRK1 0724 Location: 25568-26033 bp Feature: gene Location: 26149-26631 bp Ori: OYL93055.1 Feature: domain Description: SmpB Location: 26179-26623 bp Feature: domain Description: SmpB Location: 261 79-26623 bp Feature: gene Location: 27246-28019 bp Ori: OYL93056.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 27381-27834 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 27381 -27834 bp Feature: gene Location: 28423-28641 bp Ori: OYL93057.1 Feature: domain Description: PRK09678 Location: 28426-28624 bp Feature: domain Description: PRK09678 Location: 28426-28624 bp Feature: gene Location: 28732-29832 bp Ori: OYL93058.1 Feature: domain Description: D Location: 28747-29818 bp Feature: domain Description: D Location: 28747-2981 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional), D (PHA02561)

Seq: NQEG01000077.1 Klebsiella pneumoniae strain KPPUTH07 165-ESBL-SIUK-16_NODE_3.ctg_1, whole genome shotgun sequence (353809 bp)
Overview 1 RT 1: 97686-104090 bp Neighborhood of RT #1 [97686, 104090] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 97686-97916 bp Feature: gene Location: 98799-101075 bp Ori: OYL87373.1 Feature: domain Description: AAA_15 Location: 98832-99840 bp Feature: domain Description: AAA_15 Location: 98832 -99840 bp Feature: gene Location: 101190-102290 bp Ori: OYL87374.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101370-101904 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101370-101904 bp Feature: gene Location: 102946-103440 bp Ori: OYL87577.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 103090-103264 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 103090-1032 64 bp Feature: gene Location: 103812-104090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: NQEG01000015.1 Klebsiella pneumoniae strain KPPUTH07 165-ESBL-SIUK-16_NODE_6.ctg_1, whole genome shotgun sequence (292267 bp)
Overview 1 RT 1: 274668-281967 bp Neighborhood of RT #1 [274668, 281967] SLATT_5 RVT-UG17 CoiA RVT-GII PRK10597 Feature: gene Location: 274668-275348 bp Feature: gene Location: 276193-276732 bp Ori: OYL96418.1 Feature: domain Description: SLATT_5 Location: 276199-276712 bp Feature: domain Description: SLATT_5 Location: 276199-276712 bp Feature: gene Location: 276722-278092 bp Ori: OYL96419.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 276950-277556 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 276950-277556 bp Feature: gene Location: 278466-279170 bp Ori: OYL96420.1 Feature: domain Description: CoiA Location: 278523-278853 bp Feature: domain Description: CoiA Location: 278523 -278853 bp Feature: gene Location: 279618-279869 bp Feature: gene Location: 279869-281353 bp Ori: OYL96422.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280271-280961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280271-280961 bp Feature: gene Location: 281432-281665 bp Ori: OYL96423.1 Feature: domain Description: PRK10597 Location: 281435-281660 bp Feature: domain Description: PRK10597 Location: 28143 5-281660 bp Feature: gene Location: 281677-281967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, CoiA (pfam06054), RVT-GII, PRK10597 (DNA damage-inducible protein I; Provisional)