myRT

myRT report for GCA_002248595.1_ASM224859v1

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Seq: NQEL01000019.1 Klebsiella pneumoniae subsp. pneumoniae strain KPPSTH04 170-ESBL-SIPK-8_NODE_65.ctg_1, whole genome shotgun sequence (1914 bp)
Overview 1 RT 1: 59-1794 bp Neighborhood of RT #1 [59, 1794] RVT-GII Feature: gene Location: 59-1543 bp Ori: OYM33326.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 -1 1 51 bp Feature: gene Location: 1543-1794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NQEL01000054.1 Klebsiella pneumoniae subsp. pneumoniae strain KPPSTH04 170-ESBL-SIPK-8_NODE_15.ctg_1, whole genome shotgun sequence (146346 bp)
Overview 1 RT 1: 31482-38863 bp Neighborhood of RT #1 [31482, 38880] PRK09692 Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31482-32720 bp Feature: domain Description: PRK09692 Location: 31488-32670 bp Feature: domain Description: PRK09692 Location: 31488-32 670 bp Feature: gene Location: 32947-33406 bp Feature: domain Description: Integrase_1 Location: 32968-33235 bp Feature: domain Description: Integrase_1 Location: 32 968-332 35 bp Feature: gene Location: 33397-35478 bp Ori: OYM27138.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33808-34252 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33808-342 52 bp Feature: gene Location: 35475-38069 bp Ori: OYM27139.1 Feature: domain Description: FimD Location: 35517-38058 bp Feature: domain Description: FimD Location: 35517-38058 bp Feature: gene Location: 38116-38880 bp Ori: OYM27140.1 Feature: domain Description: FimC Location: 38161-38863 bp Feature: domain Description: FimC Location: 38161-38863 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)