myRT

myRT report for GCA_002248745.1_ASM224874v1

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Seq: NQBZ01000189.1 Shigella sonnei strain ECSW+10 115-ESBL-VC32_NODE_156.ctg_1, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 60-1795 bp Neighborhood of RT #1 [60, 1795] RVT-GII Feature: gene Location: 60-1544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1 1 52 bp Feature: gene Location: 1544-1795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NQBZ01000066.1 Shigella sonnei strain ECSW+10 115-ESBL-VC32_NODE_149.ctg_1, whole genome shotgun sequence (2300 bp)
Overview 1 RT 1: 93-2300 bp Neighborhood of RT #1 [93, 2300] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1687-1995 bp Feature: gene Location: 1910-2300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NQBZ01000044.1 Shigella sonnei strain ECSW+10 115-ESBL-VC32_NODE_63.ctg_1, whole genome shotgun sequence (27790 bp)
Overview 1 RT 1: 16055-20580 bp Neighborhood of RT #1 [16055, 21419] YeeP RVT-GII HTH_17 PLDc_N_DEXD_c DEXDc_RapA SF2_C_SNF Feature: gene Location: 16055-16930 bp Feature: domain Description: YeeP Location: 16070-16928 bp Feature: domain Description: YeeP Location: 16070-16928 bp Feature: gene Location: 17156-17398 bp Feature: gene Location: 17388-17670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17394-17484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173 94-17484 bp Feature: gene Location: 17959-18138 bp Feature: domain Description: HTH_17 Location: 17977-18121 bp Feature: domain Description: HTH_17 Location: 17977-18121 bp Feature: gene Location: 18153-21419 bp Feature: domain Description: PLDc_N_DEXD_c Location: 18168-18579 bp Feature: domain Description: PLDc_N_DEXD_c Location: 18168-18579 bp Feature: domain Description: DEXDc_RapA Location: 18840-19407 bp Feature: domain Description: DEXDc_RapA Location: 18840-19407 bp Feature: domain Description: SF2_C_SNF Location: 19986-20580 bp Feature: domain Description: SF2_C_SNF Location: 19986-20580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeP (COG3596), RVT-GII, HTH_17 (pfam12728), PLDc_N_DEXD_c (cd10311), DEXDc_RapA (cd18011), SF2_C_SNF (cd18793)