myRT

myRT report for GCA_002248945.2_ASM224894v2

Download annotations/find similar RTs

Seq: NQCW02000002.1 Klebsiella quasipneumoniae subsp. similipneumoniae strain KPCTRSRTH05 KPCTRSRTH05_contig_2, whole genome shotgun sequence (141897 bp)
Overview 1 RT 1: 90301-94140 bp Neighborhood of RT #1 [90301, 94160] INT_Cre_C RVT-GII HHA Feature: gene Location: 90301-90618 bp Feature: gene Location: 90684-91820 bp Ori: TNJ89288.1 Feature: domain Description: INT_Cre_C Location: 91107-91761 bp Feature: domain Description: INT_Cre_C Location: 91 1 07-91 761 bp Feature: gene Location: 91906-93390 bp Ori: TNJ89348.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92308-92998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92308-92998 bp Feature: gene Location: 93523-93774 bp Feature: gene Location: 93906-94160 bp Ori: TNJ89289.1 Feature: domain Description: HHA Location: 93957-94140 bp Feature: domain Description: HHA Location: 93957-941 40 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)

Seq: NQCW02000001.1 Klebsiella quasipneumoniae subsp. similipneumoniae strain KPCTRSRTH05 KPCTRSRTH05_contig_1, whole genome shotgun sequence (5108592 bp)
Overview 1 RT 1: 4497063-4500970 bp Neighborhood of RT #1 [4497063, 4500975] RVT-UG17 SLATT_5 CbtA_toxin Feature: gene Location: 4497063-4497308 bp Feature: gene Location: 4497664-4498440 bp Feature: gene Location: 4498602-4499975 bp Ori: TNJ94635.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4498833-4499439 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4498833-4499439 bp Feature: gene Location: 4499968-4500507 bp Ori: TNJ94636.1 Feature: domain Description: SLATT_5 Location: 4499974-4500493 bp Feature: domain Description: SLATT_5 Location: 4499974-4500493 bp Feature: gene Location: 4500877-4500975 bp Ori: TNJ94637.1 Feature: domain Description: CbtA_toxin Location: 4500880-4500970 bp Feature: domain Description: CbtA_toxin Location: 4500880-4500970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), CbtA_toxin (pfam06755)