myRT

myRT report for GCA_002250015.1_ASM225001v1

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Seq: CP022690.1 Kosakonia cowanii strain Esp_Z genome (5077975 bp)
Overview 1 RT 1: 2926571-2929800 bp 2 RT 2: 5056256-5059888 bp Neighborhood of RT #1 [2926571, 2930236] PRK10276 RVT_N RVT-GII GIIM HNHc PRK10276 umuC Neighborhood of RT #2 [5056256, 5059902] SymE_toxin RVT-Retrons PRK09692 Feature: gene Location: 2926571-2926684 bp Feature: domain Description: PRK10276 Location: 2926586-2926685 bp Feature: domain Description: PRK1 0276 Location: 2926586-2926685 bp Feature: gene Location: 2926726-2927024 bp Feature: gene Location: 2927295-2929010 bp Feature: RT Description: RVT_N Location: 2927349-2927583 bp Feature: RT Description: RVT_N Location: 2927349-2927583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2927637-2928288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2927637-2928288 bp Feature: domain Description: GIIM Note: maturase Location: 2928342-2928573 bp Feature: domain Description: GIIM Note: maturase Location: 2928342-2928573 bp Feature: domain Description: HNHc Note: nucleases Location: 2928807-2928963 bp Feature: domain Description: HNHc Note: nucleases Location: 2928807-2928963 bp Feature: gene Location: 2929093-2929422 bp Feature: domain Description: PRK10276 Location: 2929099-2929396 bp Feature: domain Description: PRK1 0276 Location: 2929099-2929396 bp Feature: gene Location: 2929410-2930236 bp Feature: domain Description: umuC Location: 2929416-2929800 bp Feature: domain Description: umuC Location: 292941 6-2929800 bp Feature: gene Location: 5056256-5056555 bp Feature: domain Description: SymE_toxin Location: 5056310-5056448 bp Feature: domain Description: SymE_toxin Location: 505631 0-5056448 bp Feature: gene Location: 5056690-5056884 bp Feature: gene Location: 5057112-5058023 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5057211-5057790 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 505721 1 -5057790 bp Feature: gene Location: 5058013-5058948 bp Feature: gene Location: 5059279-5059902 bp Feature: domain Description: PRK09692 Location: 5059288-5059888 bp Feature: domain Description: PRK09692 Location: 5059288-5059888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), umuC (PRK03609), SymE_toxin (pfam08845), RVT-Retrons, PRK09692 (Integrase; provisional)