myRT

myRT report for GCA_002250505.1_ASM225050v1

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Seq: NJGY01000002.1 Janthinobacterium sp. PC23-8 NODE_2_length_986135_cov_154.686, whole genome shotgun sequence (986135 bp)
Overview 1 RT 1: 783445-789854 bp Neighborhood of RT #1 [783445, 789868] serB MscS Crp RVT-GII zf-IS66 DDE_Tnp_IS66 PRK07588 Feature: gene Location: 783445-784287 bp Feature: domain Description: serB Location: 783574-784282 bp Feature: domain Description: serB Location: 783574-784282 bp Feature: gene Location: 784288-785733 bp Feature: domain Description: MscS Location: 784315-785080 bp Feature: domain Description: MscS Location: 78431 5-785080 bp Feature: domain Description: Crp Location: 785251-785650 bp Feature: domain Description: Crp Location: 785251 -785650 bp Feature: gene Location: 785939-787711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786644-787334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786644-787334 bp Feature: gene Location: 787782-789116 bp Feature: domain Description: zf-IS66 Location: 787989-788127 bp Feature: domain Description: zf-IS66 Location: 787989-7881 27 bp Feature: domain Description: DDE_Tnp_IS66 Location: 788175-789006 bp Feature: domain Description: DDE_Tnp_IS66 Location: 7881 75-789006 bp Feature: gene Location: 789443-789868 bp Feature: domain Description: PRK07588 Location: 789446-789854 bp Feature: domain Description: PRK07588 Location: 789446-789854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT serB (TIGR00338), MscS (COG0668), Crp (pfam00325), RVT-GII, zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), PRK07588 (FAD-binding domain)

Seq: NJGY01000003.1 Janthinobacterium sp. PC23-8 NODE_3_length_915286_cov_178.587, whole genome shotgun sequence (915286 bp)
Overview 1 RT 1: 677305-681873 bp 2 RT 2: 791392-796034 bp Neighborhood of RT #1 [677305, 681917] DUF1566 Avd_like RVT-DGRs Dam Dcm Dcm Neighborhood of RT #2 [791392, 796063] near_uncomplex NT_KNTase_like RVT-GII Rve PCBER_SDR_a Feature: gene Location: 677305-677610 bp Feature: domain Description: DUF1566 Location: 677419-677596 bp Feature: domain Description: DUF1566 Location: 677419-677596 bp Feature: gene Location: 677629-678003 bp Feature: domain Description: Avd_like Location: 677662-677962 bp Feature: domain Description: Avd_like Location: 677662 -677962 bp Feature: gene Location: 678348-679364 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 678450-679137 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 678450-679137 bp Feature: gene Location: 679519-680373 bp Feature: domain Description: Dam Location: 679537-680290 bp Feature: domain Description: Dam Location: 679537-6802 90 bp Feature: gene Location: 680370-681917 bp Feature: domain Description: Dcm Location: 680421-680856 bp Feature: domain Description: Dcm Location: 68042 1-680856 bp Feature: domain Description: Dcm Location: 680940-681873 bp Feature: domain Description: Dcm Location: 680940-681873 bp Feature: gene Location: 791392-792318 bp Feature: domain Description: near_uncomplex Location: 791446-792139 bp Feature: domain Description: near_uncomplex Location: 791446-792 139 bp Feature: gene Location: 792315-793043 bp Feature: domain Description: NT_KNTase_like Location: 792351-792576 bp Feature: domain Description: NT_KNTase_like Location: 792 351-792 576 bp Feature: gene Location: 793133-794905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 793838-794528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 793838-79452 8 bp Feature: gene Location: 795011-795133 bp Feature: domain Description: Rve Location: 795017-795131 bp Feature: domain Description: Rve Location: 795017-795131 bp Feature: gene Location: 795146-796063 bp Feature: domain Description: PCBER_SDR_a Location: 795167-796034 bp Feature: domain Description: PCBER_SDR_a Location: 795167-796034 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, Dam (pfam05869), Dcm (COG0270), near_uncomplex (TIGR04222), NT_KNTase_like (cd05403), RVT-GII, Rve (COG3316), PCBER_SDR_a (cd05259)

Seq: NJGY01000001.1 Janthinobacterium sp. PC23-8 NODE_1_length_3492051_cov_246.704, whole genome shotgun sequence (3492051 bp)
Overview 1 RT 1: 1107148-1112960 bp Neighborhood of RT #1 [1107148, 1112986] ligand_gated_channel RVT-GII GIIM ARA1 ARA1 Feature: gene Location: 1107148-1109559 bp Feature: domain Description: ligand_gated_channel Location: 1107346-1109557 bp Feature: domain Description: ligand_gated_channel Location: 11073 46-1109557 bp Feature: gene Location: 1109615-1109965 bp Feature: gene Location: 1110022-1111389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1110355-1110970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11103 55-1110970 bp Feature: domain Description: GIIM Note: maturase Location: 1111027-1111231 bp Feature: domain Description: GIIM Note: maturase Location: 1111027-111123 1 bp Feature: gene Location: 1111824-1112132 bp Feature: gene Location: 1112168-1112986 bp Feature: domain Description: ARA1 Location: 1112192-1112414 bp Feature: domain Description: ARA1 Location: 1112192-1112414 bp Feature: domain Description: ARA1 Location: 1112693-1112960 bp Feature: domain Description: ARA1 Location: 1112693 -1112960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ligand_gated_channel (cd01347), RVT-GII, GIIM (pfam08388), ARA1 (COG0656)