myRT

myRT report for GCA_002251605.2_ASM225160v2

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Seq: NCTJ02000008.1 Ralstonia solanacearum strain UW700, whole genome shotgun sequence (3162210 bp)
Overview 1 RT 1: 764348-769808 bp Neighborhood of RT #1 [764348, 769822] RVT-Retrons nitrilase DUF4337 Feature: gene Location: 764348-765103 bp Feature: gene Location: 765106-765450 bp Feature: gene Location: 766276-768033 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 766411-767053 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 76641 1 -767053 bp Feature: gene Location: 768437-769191 bp Feature: domain Description: nitrilase Location: 768458-769019 bp Feature: domain Description: nitrilase Location: 768458-76901 9 bp Feature: gene Location: 769250-769822 bp Feature: domain Description: DUF4337 Location: 769340-769808 bp Feature: domain Description: DUF4337 Location: 769340-769808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, nitrilase (cl11424), DUF4337 (pfam14235)

Seq: NCTJ02000002.1 Ralstonia solanacearum strain UW700, whole genome shotgun sequence (1699476 bp)
Overview 1 RT 1: 364470-372008 bp 2 RT 2: 1366927-1372262 bp Neighborhood of RT #1 [364470, 372008] TM_helix TM_helix TM_helix TM_helix TM_helix PRK02237 RVT-GII UvrD Neighborhood of RT #2 [1366927, 1372267] OafA COG3795 RVT-GII PRK11169 Feature: gene Location: 364470-365933 bp Feature: domain Description: TM_helix Location: 364488-364629 bp Feature: domain Description: TM_helix Location: 364488-36462 9 bp Feature: domain Description: TM_helix Location: 364758-364902 bp Feature: domain Description: TM_helix Location: 364758-364902 bp Feature: domain Description: TM_helix Location: 365031-365172 bp Feature: domain Description: TM_helix Location: 365031-365172 bp Feature: domain Description: TM_helix Location: 365307-365445 bp Feature: domain Description: TM_helix Location: 365307-365445 bp Feature: domain Description: TM_helix Location: 365592-365694 bp Feature: domain Description: TM_helix Location: 365592 -365694 bp Feature: gene Location: 366013-366345 bp Feature: domain Description: PRK02237 Location: 366025-366337 bp Feature: domain Description: PRK02 2 37 Location: 36602 5-366337 bp Feature: gene Location: 366390-367922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366801-367491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366801-367491 bp Feature: gene Location: 368375-370507 bp Feature: domain Description: UvrD Location: 368432-370415 bp Feature: domain Description: UvrD Location: 368432 -370415 bp Feature: gene Location: 370536-372008 bp Feature: gene Location: 1366927-1368054 bp Feature: domain Description: OafA Location: 1366936-1368028 bp Feature: domain Description: OafA Location: 1366936-136802 8 bp Feature: gene Location: 1368422-1368853 bp Feature: domain Description: COG3795 Location: 1368425-1368791 bp Feature: domain Description: COG3795 Location: 136842 5-1368791 bp Feature: gene Location: 1369534-1371066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1369945-1370635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1369945-1370635 bp Feature: gene Location: 1371204-1371509 bp Feature: gene Location: 1371743-1372267 bp Feature: domain Description: PRK11169 Location: 1371803-1372262 bp Feature: domain Description: PRK11169 Location: 1371803-1372 2 62 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TM_helix (pfam05552), PRK02237 (YnfA family protein), RVT-GII, UvrD (COG0210), OafA (COG1835), COG3795 (Uncharacterized conserved protein ), PRK11169 (leucine-responsive transcriptional regulator Lrp)