myRT

myRT report for GCA_002252065.1_ASM225206v1

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Seq: NEFB01000041.1 Citrobacter freundii strain 181 Scaffold41, whole genome shotgun sequence (53652 bp)
Overview 1 RT 1: 2682-7383 bp Neighborhood of RT #1 [2682, 7383] RVT-GII GIIM PHA02517 Feature: gene Location: 2682-3092 bp Feature: gene Location: 3007-3432 bp Feature: gene Location: 3401-4909 bp Ori: OYQ95912.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3659-4391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3659-4391 bp Feature: domain Description: GIIM Note: maturase Location: 4466-4664 bp Feature: domain Description: GIIM Note: maturase Location: 4466-4664 bp Feature: gene Location: 4990-5466 bp Feature: domain Description: PHA02517 Location: 4993-5458 bp Feature: domain Description: PHA0251 7 Location: 4993-5458 bp Feature: gene Location: 5842-7383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: NEFB01000007.1 Citrobacter freundii strain 181 Scaffold7, whole genome shotgun sequence (143986 bp)
Overview 1 RT 1: 333-4186 bp Neighborhood of RT #1 [333, 4186] RVT-UG12 RVT-UG12 emrE Feature: gene Location: 333-605 bp Feature: gene Location: 637-1041 bp Feature: gene Location: 1032-1547 bp Ori: OYR03570.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1419-1542 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1419-1542 bp Feature: gene Location: 1481-2608 bp Ori: OYR03571.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1490-1847 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1490-1847 bp Feature: gene Location: 2853-3185 bp Ori: OYR03572.1 Feature: domain Description: emrE Location: 2856-3183 bp Feature: domain Description: emrE Location: 2 856-3183 bp Feature: gene Location: 3593-4186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12, emrE (PRK09541)