myRT

myRT report for GCA_002252415.1_ASM225241v1

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Seq: NOKM01000022.1 Klebsiella pneumoniae strain SCKP-LL83 NODE_22_length_98759_cov_50.4191, whole genome shotgun sequence (98759 bp)
Overview 1 RT 1: 678-7531 bp Neighborhood of RT #1 [678, 7548] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 678-1343 bp Feature: domain Description: INT_P4_C Location: 783-1341 bp Feature: domain Description: INT_P4_C Location: 783-1 341 bp Feature: gene Location: 1604-2044 bp Feature: domain Description: Integrase_1 Location: 1610-1826 bp Feature: domain Description: Integrase_1 Location: 1 61 0-1 826 bp Feature: gene Location: 2101-4179 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2509-2953 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2509-2953 bp Feature: gene Location: 4179-6788 bp Feature: domain Description: FimD Location: 4236-6777 bp Feature: domain Description: FimD Location: 4236-6777 bp Feature: gene Location: 6820-7548 bp Feature: domain Description: FimC Location: 6868-7531 bp Feature: domain Description: FimC Location: 6868-7531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NOKM01000079.1 Klebsiella pneumoniae strain SCKP-LL83 NODE_79_length_1892_cov_391.983, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII