myRT

myRT report for GCA_002253165.1_ASM225316v1

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Seq: NGOE01000034.1 Lactobacillus johnsonii strain 117q 117q_40, whole genome shotgun sequence (154556 bp)
Overview 1 RT 1: 126260-133843 bp Neighborhood of RT #1 [126260, 133857] PTS_IIB_chitobiose_lichenan SIR2-like RVT-AbiA HEPN_AbiA_CTD RmlD_sub_bind dTDP_sugar_isom Feature: gene Location: 126260-126568 bp Ori: OYS07229.1 Feature: domain Description: PTS_IIB_chitobiose_lichenan Location: 126272-126548 bp Feature: domain Description: PTS_IIB_chitobiose_lichenan Location: 1 26272-1 26548 bp Feature: gene Location: 126865-129681 bp Ori: OYS07230.1 Feature: domain Description: SIR2-like Location: 126943-127531 bp Feature: domain Description: SIR2-like Location: 1 26943-1 27531 bp Feature: gene Location: 130123-132048 bp Ori: OYS07231.1 Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 130507-131017 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 1 30507-1 31 01 7 bp Feature: domain Description: HEPN_AbiA_CTD Location: 131656-132028 bp Feature: domain Description: HEPN_AbiA_CTD Location: 1 31 656-1 32028 bp Feature: gene Location: 132246-133232 bp Ori: OYS07232.1 Feature: domain Description: RmlD_sub_bind Location: 132249-133197 bp Feature: domain Description: RmlD_sub_bind Location: 1 32249-1 331 97 bp Feature: gene Location: 133249-133857 bp Ori: OYS07233.1 Feature: domain Description: dTDP_sugar_isom Location: 133288-133843 bp Feature: domain Description: dTDP_sugar_isom Location: 1 33288-1 33843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTS_IIB_chitobiose_lichenan (cd05564), SIR2-like (cd01406), RVT-AbiA, HEPN_AbiA_CTD (pfam18732), RmlD_sub_bind (pfam04321), dTDP_sugar_isom (pfam00908)

Seq: NGOE01000024.1 Lactobacillus johnsonii strain 117q 117q_30, whole genome shotgun sequence (1943 bp)
Overview 1 RT 1: 563-1646 bp Neighborhood of RT #1 [563, 1858] RVT-GII GIIM Feature: gene Location: 563-1858 bp Ori: OYS07489.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1382 bp Feature: domain Description: GIIM Note: maturase Location: 1436-1646 bp Feature: domain Description: GIIM Note: maturase Location: 1436-1646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)