myRT

myRT report for GCA_002253185.1_ASM225318v1

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Seq: NGOD01000011.1 Lactobacillus johnsonii strain 117x 117x_11, whole genome shotgun sequence (275354 bp)
Overview 1 RT 1: 137507-145084 bp Neighborhood of RT #1 [137507, 145104] dTDP_sugar_isom RmlD_sub_bind RVT-AbiA HEPN_AbiA_CTD SIR2-like PTS_IIB_chitobiose_lichenan Feature: gene Location: 137507-138115 bp Ori: OYS05058.1 Feature: domain Description: dTDP_sugar_isom Location: 137546-138101 bp Feature: domain Description: dTDP_sugar_isom Location: 1 37546-1 381 01 bp Feature: gene Location: 138132-139118 bp Ori: OYS05059.1 Feature: domain Description: RmlD_sub_bind Location: 138135-139083 bp Feature: domain Description: RmlD_sub_bind Location: 1 381 35-1 39083 bp Feature: gene Location: 139316-141241 bp Ori: OYS05060.1 Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 139700-140210 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 1 39700-1 4021 0 bp Feature: domain Description: HEPN_AbiA_CTD Location: 140849-141221 bp Feature: domain Description: HEPN_AbiA_CTD Location: 1 40849-1 41 221 bp Feature: gene Location: 141683-144499 bp Ori: OYS05061.1 Feature: domain Description: SIR2-like Location: 141761-142349 bp Feature: domain Description: SIR2-like Location: 1 41 761 -1 42349 bp Feature: gene Location: 144796-145104 bp Ori: OYS05062.1 Feature: domain Description: PTS_IIB_chitobiose_lichenan Location: 144808-145084 bp Feature: domain Description: PTS_IIB_chitobiose_lichenan Location: 1 44808-1 45084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dTDP_sugar_isom (pfam00908), RmlD_sub_bind (pfam04321), RVT-AbiA, HEPN_AbiA_CTD (pfam18732), SIR2-like (cd01406), PTS_IIB_chitobiose_lichenan (cd05564)

Seq: NGOD01000039.1 Lactobacillus johnsonii strain 117x 117x_39, whole genome shotgun sequence (469 bp)
Overview 1 RT 1: 88-424 bp Neighborhood of RT #1 [88, 453] RVT-GII Feature: gene Location: 88-453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 181-424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 181-42 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NGOD01000016.1 Lactobacillus johnsonii strain 117x 117x_16, whole genome shotgun sequence (1943 bp)
Overview 1 RT 1: 86-1169 bp Neighborhood of RT #1 [86, 1381] RVT-GII GIIM Feature: gene Location: 86-1381 bp Ori: OYS04651.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287-905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287-905 bp Feature: domain Description: GIIM Note: maturase Location: 959-1169 bp Feature: domain Description: GIIM Note: maturase Location: 959-1169 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)