myRT

myRT report for GCA_002253285.1_ASM225328v1

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Seq: NGOI01000023.1 Lactobacillus johnsonii strain 117a 117a_23, whole genome shotgun sequence (1943 bp)
Overview 1 RT 1: 86-1169 bp Neighborhood of RT #1 [86, 1381] RVT-GII GIIM Feature: gene Location: 86-1381 bp Ori: OYS13447.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287-905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287-905 bp Feature: domain Description: GIIM Note: maturase Location: 959-1169 bp Feature: domain Description: GIIM Note: maturase Location: 959-1 1 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NGOI01000011.1 Lactobacillus johnsonii strain 117a 117a_11, whole genome shotgun sequence (271362 bp)
Overview 1 RT 1: 126260-133843 bp Neighborhood of RT #1 [126260, 133857] PTS_IIB_chitobiose_lichenan SIR2-like RVT-AbiA HEPN_AbiA_CTD RmlD_sub_bind dTDP_sugar_isom Feature: gene Location: 126260-126568 bp Ori: OYS14147.1 Feature: domain Description: PTS_IIB_chitobiose_lichenan Location: 126272-126548 bp Feature: domain Description: PTS_IIB_chitobiose_lichenan Location: 12 62 72 -12 6548 bp Feature: gene Location: 126865-129681 bp Ori: OYS14148.1 Feature: domain Description: SIR2-like Location: 126943-127531 bp Feature: domain Description: SIR2 -like Location: 12 6943-12 7531 bp Feature: gene Location: 130123-132048 bp Ori: OYS14149.1 Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 130507-131017 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 130507-131017 bp Feature: domain Description: HEPN_AbiA_CTD Location: 131656-132028 bp Feature: domain Description: HEPN_AbiA_CTD Location: 131656-132 02 8 bp Feature: gene Location: 132246-133232 bp Ori: OYS14150.1 Feature: domain Description: RmlD_sub_bind Location: 132249-133197 bp Feature: domain Description: RmlD_sub_bind Location: 132 2 49-133197 bp Feature: gene Location: 133249-133857 bp Ori: OYS14151.1 Feature: domain Description: dTDP_sugar_isom Location: 133288-133843 bp Feature: domain Description: dTDP_sugar_isom Location: 1332 88-133843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTS_IIB_chitobiose_lichenan (cd05564), SIR2-like (cd01406), RVT-AbiA, HEPN_AbiA_CTD (pfam18732), RmlD_sub_bind (pfam04321), dTDP_sugar_isom (pfam00908)